| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_4436 |
|---|
| Symbol | |
|---|
| ID | 4582986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | - |
|---|
| Start bp | 1644105 |
|---|
| End bp | 1645277 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639771743 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_918196 |
|---|
| Protein GI | 119387141 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.47548 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGA CCGTTTCCGC GCAAGCCCGC CGCGCGCCCC GCATCCGCCT TGGCATGGTC
GGCGGCGGGC AGGGTGCCTT CATCGGCGGT GTGCACCGCA TCGCCGCCCG CATCGACGAC
CAGTATGAGC TGGTCGCGGG CTGCTTTTCC TCGACGCCCG GCAAAAGCAC GGCCTCGGCG
GCGGAACTGG GCGTGGGCCG CGCCTATGGC GATTTCGCGC AGATGGCGAT GCGCGAGGCG
CGGCGCAAGG ACGGGATCGA GGCGGTGGCC ATCGTCACCC CGAACCACCT GCACGCGCCC
GTCGCCCGCG AGTTCCTGAA ACGCGGCATC CATGTCATCT GCGACAAGCC CCTGACCGCG
ACCCTGCCCG AGGCGCGCAA GCTGGCCAAG GCGGCCCGGG GGTCGGATAC GCTGTTCGTG
CTGACGCACA ACTACACCGG CTATCCGATG GTCCGGCAGG CCCGTGCCAT GACCCTTGCG
GGCGAATTGG GCGAGATCCG GCTGGTGCAG GTCGAGTATG CGCAGGACTG GCTGGCCGAG
CCCATCGAGC AGGCGGGCAA CAAGCAGGCC GGCTGGCGCA CCGATCCGGC GCAATCCGGT
GCGGGCGGGG CCATCGGCGA CATCGGCACC CATGCCTTCA ACCTTGCCGG CTTCGTGACC
GGGCTGGAGC TTGAGGCGCT GGCCGCCGAC CTGCAAAGCT TCGTGCCGGG CCGGGCGGTT
GACGACAACG GCCATGTGCT GCTGCGCTAC CAGGGCGGGG CGCGCGGGAT GCTGTGGTGC
AGCCAGGTCG CCTCGGGCTG CGAGAATGCG CTGCGGCTGC GGGTTTATGG CACCCGCGCC
GGCATCGAAT GGGCGCAGGA AGAGCCGAAT TACCTGTGGG TCGCGCCCCT GGGCCGGCCG
CGCTATCGGC TGTCGCGCGG CGGCGCCGGC ACGGGGGCCG AGGCCGCGCG CCTGACCCGC
ATCCCCGCCG GCCATCCCGA GGGCTATCTG GAGGGTTTCG CGAACATCTA TGCCGAGGCG
GCGCGCGCCA TCCTTGCCCG TCGCGCCGGC GTCGTGCCCG ACCCGGCGGC GACCTTCCCC
GGCATCCGCG AGGGGCTGGA GGGCGTGGCC TTCGTCGATG CCTGCCTGCG CTCCAGCAGG
CGCAACGGCG CCTGGGTCGC GCCGGCGCTT TAG
|
|---|
| Protein sequence | MTQTVSAQAR RAPRIRLGMV GGGQGAFIGG VHRIAARIDD QYELVAGCFS STPGKSTASA
AELGVGRAYG DFAQMAMREA RRKDGIEAVA IVTPNHLHAP VAREFLKRGI HVICDKPLTA
TLPEARKLAK AARGSDTLFV LTHNYTGYPM VRQARAMTLA GELGEIRLVQ VEYAQDWLAE
PIEQAGNKQA GWRTDPAQSG AGGAIGDIGT HAFNLAGFVT GLELEALAAD LQSFVPGRAV
DDNGHVLLRY QGGARGMLWC SQVASGCENA LRLRVYGTRA GIEWAQEEPN YLWVAPLGRP
RYRLSRGGAG TGAEAARLTR IPAGHPEGYL EGFANIYAEA ARAILARRAG VVPDPAATFP
GIREGLEGVA FVDACLRSSR RNGAWVAPAL
|
|---|
| |