12 homologs were found in PanDaTox collection
for query gene CPR_0923 on replicon NC_008262
Organism: Clostridium perfringens SM101



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008262  CPR_0923  hypothetical protein  100 
 
 
77 aa  154  4e-37  Clostridium perfringens SM101  Bacteria  decreased coverage  6.01668e-09  n/a   
 
 
-
 
NC_008261  CPF_1039  radical SAM domain-containing protein  94.81 
 
 
231 aa  143  6e-34  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0813206  n/a   
 
 
-
 
NC_009802  CCC13826_1012  signal recognition particle protein  34.67 
 
 
304 aa  50.1  1e-05  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0316  Radical SAM domain protein  32.89 
 
 
303 aa  47.4  7e-05  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0538  Radical SAM domain protein  32.91 
 
 
303 aa  47  9e-05  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00127188  n/a   
 
 
-
 
NC_009715  CCV52592_1472  radical SAM domain-containing protein  28.57 
 
 
300 aa  43.1  0.001  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_0482  radical SAM domain-containing protein  34.29 
 
 
300 aa  43.5  0.001  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.992471  n/a   
 
 
-
 
NC_008787  CJJ81176_1259  radical SAM domain-containing protein  34.29 
 
 
300 aa  43.5  0.001  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1380  radical SAM domain-containing protein  34.29 
 
 
300 aa  43.5  0.001  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_1455  radical SAM domain-containing protein  30.43 
 
 
308 aa  41.2  0.005  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
NC_012039  Cla_0530  conserved hypothetical protein, putative radical SAM domain protein  33.33 
 
 
302 aa  41.2  0.005  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0458  Radical SAM domain protein  39.13 
 
 
332 aa  40.8  0.006  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>