8 homologs were found in PanDaTox collection
for query gene BBta_6001 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009485  BBta_6001    100 
 
 		 273 bp  541  9.999999999999999e-153  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  decreased coverage  0.00539864 
 
 
-
 
NC_010505  Mrad2831_1759  hypothetical protein  91.04 
 
 		 510 bp  85.7  0.000000000000006  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_2369    89.71 
 
 		 216 bp  79.8  0.0000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.461434  n/a   
 
 
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NC_010172  Mext_2776  hypothetical protein  88.24 
 
 		 510 bp  71.9  0.00000000009  Methylobacterium extorquens PA1  Bacteria  normal  0.27949  normal  1 
 
 
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NC_010725  Mpop_2899  protein of unknown function DUF892  88.06 
 
 		 510 bp  69.9  0.0000000003  Methylobacterium populi BJ001  Bacteria  normal  0.405335  normal  1 
 
 
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NC_007925  RPC_1900  hypothetical protein  86.3 
 
 		 495 bp  65.9  0.000000005  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
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NC_011757  Mchl_3003  protein of unknown function DUF892  86.76 
 
 		 510 bp  63.9  0.00000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.349145  normal  0.119787 
 
 
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NC_009428  Rsph17025_0605  hypothetical protein  96.43 
 
 		 507 bp  48.1  0.001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
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