8 homologs were found in PanDaTox collection
for query gene BBta_6001 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_6001    100 
 
 
273 bp  541  1e-152  Bradyrhizobium sp. BTAi1  Bacteria  normal  decreased coverage  0.00539864 
 
 
-
 
NC_010505  Mrad2831_1759  hypothetical protein  91.04 
 
 
510 bp  85.7  6e-15  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2369    89.71 
 
 
216 bp  79.8  4e-13  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.461434  n/a   
 
 
-
 
NC_010172  Mext_2776  hypothetical protein  88.24 
 
 
510 bp  71.9  9e-11  Methylobacterium extorquens PA1  Bacteria  normal  0.27949  normal 
 
 
-
 
NC_010725  Mpop_2899  protein of unknown function DUF892  88.06 
 
 
510 bp  69.9  3e-10  Methylobacterium populi BJ001  Bacteria  normal  0.405335  normal 
 
 
-
 
NC_007925  RPC_1900  hypothetical protein  86.3 
 
 
495 bp  65.9  5e-09  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3003  protein of unknown function DUF892  86.76 
 
 
510 bp  63.9  2e-08  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.349145  normal  0.119787 
 
 
-
 
NC_009428  Rsph17025_0605  hypothetical protein  96.43 
 
 
507 bp  48.1  0.001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
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