Gene RPC_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1900 
Symbol 
ID3973418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2071416 
End bp2071910 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content61% 
IMG OID637925011 
Producthypothetical protein 
Protein accessionYP_531776 
Protein GI90423406 
COG category[S] Function unknown 
COG ID[COG3685] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGG ACGCACGTGA GATCTTCGTC GTCGGGCTGC GGAATGCCCA CGCAATGGAA 
ATCCAGGCCC GCGAAATGAT GGAACGCCAG TCGGAACGGC TCGGCGACTA TCCGGAGGTG
AAAGCGCGGG TGACGCAGCA TCTGCGCGAA ACCGAAGGTC AGATCAAGCG GCTCGACGAG
TGTCTCGCCG CCTGCGGCGA AACGTCCTCC AGCTTGAAGG ACGCGGCGCA GTCGTTCATG
GGCAACATGG CGGCGATGGC GCACACCGTG ATGCCCGACG AAATCCTGAA AAACACCTTC
GCCAATAACG CCTTCGAGCA CTTCGAGATC GCCGCTTACA AATCGCTGCT GTCGCTTGCC
GATCTCACCG GCATGAGTTC GGCCAAGCCG TTGCTCGAAG CCTCGCTGAA GGAAGAGCAG
TCGATGGCGG CCTGGATCGA TCAAAATATC GACAGCGTGA CCCGCTCCTA CGTGCGGGTG
GCGCAGGCCG CCTGA
 
Protein sequence
MAQDAREIFV VGLRNAHAME IQAREMMERQ SERLGDYPEV KARVTQHLRE TEGQIKRLDE 
CLAACGETSS SLKDAAQSFM GNMAAMAHTV MPDEILKNTF ANNAFEHFEI AAYKSLLSLA
DLTGMSSAKP LLEASLKEEQ SMAAWIDQNI DSVTRSYVRV AQAA