17 homologs were found in PanDaTox collection
for query gene YPK_1218 on replicon NC_010465
Organism: Yersinia pseudotuberculosis YPIII



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010465  YPK_1218  peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin  100 
 
 		 131 aa  273  5e-73  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_010658  SbBS512_E1933  phage capsid scaffolding protein (GpO)  65.87 
 
 		 294 aa  189  1e-47  Shigella boydii CDC 3083-94  Bacteria  normal  0.792365  n/a   
 
 
-
 
NC_009801  EcE24377A_1278  hypothetical protein  69.42 
 
 		 125 aa  179  1e-44  Escherichia coli E24377A  Bacteria  normal  0.238207  n/a   
 
 
-
 
NC_009829  Spro_4929  hypothetical protein  65.32 
 
 		 154 aa  174  3e-43  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009832  Spro_3474  putative phagelysin  59.23 
 
 		 133 aa  172  1.9999999999999998e-42  Serratia proteamaculans 568  Bacteria  normal  0.352563  normal  1 
 
 
-
 
NC_010465  YPK_2334  bacteriophage P7 related protein  57.25 
 
 		 131 aa  166  1e-40  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0124711  n/a   
 
 
-
 
NC_009708  YpsIP31758_0412  M15 family peptidase  51.2 
 
 		 133 aa  135  2e-31  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A1185  M15 family peptidase  51.2 
 
 		 133 aa  124  3e-28  Yersinia pestis Angola  Bacteria  normal  1  hitchhiker  0.000139294 
 
 
-
 
NC_010465  YPK_0476  putative phage-related protein  51.2 
 
 		 133 aa  125  3e-28  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.877845  n/a   
 
 
-
 
NC_013517  Sterm_2506  hypothetical protein  35.25 
 
 		 142 aa  85.9  2e-16  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B2620  L-alanyl-D-glutamate peptidase  45.65 
 
 		 281 aa  78.6  0.00000000000002  Bacillus cereus G9842  Bacteria  normal  1  hitchhiker  0.00000189687 
 
 
-
 
NC_011725  BCB4264_A2690  L-alanyl-D-glutamate peptidase  44.57 
 
 		 281 aa  76.6  0.0000000000001  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_012794  GWCH70_3454  peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin  32.06 
 
 		 156 aa  58.9  0.00000002  Geobacillus sp. WCH70  Bacteria  normal  0.594088  normal  0.915098 
 
 
-
 
NC_011312  VSAL_I0780  putative membrane protein, putative phage gene  31.82 
 
 		 132 aa  57  0.00000009  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0381864  n/a   
 
 
-
 
NC_013412  GYMC61_3591  peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin  30.77 
 
 		 156 aa  56.2  0.0000001  Geobacillus sp. Y412MC61  Bacteria  normal  0.0129413  n/a   
 
 
-
 
NC_011060  Ppha_2260  peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin  33.59 
 
 		 202 aa  50.1  0.00001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.0000253408  n/a   
 
 
-
 
NC_011312  VSAL_I2126  hypothetical protein  31.01 
 
 		 130 aa  48.1  0.00004  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>