5 homologs were found in PanDaTox collection
for query gene Vapar_0518 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012791  Vapar_0518  hypothetical protein  100 
 
 
208 aa  412  1e-114  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0184  hypothetical protein  41.14 
 
 
245 aa  87.8  1e-16  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4480  hypothetical protein  65.79 
 
 
111 aa  55.5  0.0000006  Polaromonas sp. JS666  Bacteria  normal  normal  0.284931 
 
 
-
 
NC_008781  Pnap_1001  hypothetical protein  63.41 
 
 
115 aa  53.9  0.000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1507  hypothetical protein  71.79 
 
 
155 aa  49.7  0.00003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
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