Gene Vapar_0518 details

Gene Information

• Locus tag: Vapar_0518
• ID: 7972928
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 570122
• End bp: 570748
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 644791121
• Product: hypothetical protein
• Protein accession: YP_002942447
• Protein GI: 239813537

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGTTG TTGGTCGTTT TCCTTCCGGA GGCCGGGATG TCCGCCCGGC GGCGGACTTA 
CTTTCTTTTG CTTCGCCAAA AGAAAGTAAG CAAAGAAAAG GCGACCCTAC TGTCTGCGTC 
CCTCCGCTTC GCTACGGGCA ACCTGCGGTG CTCGATTCCG GCGGGGGTCC GCAGAACTCG 
CTTCGCTCAA ACAGCTGCGG CCCTGATCCC GCCTCCATCT GCGCTCCTCG GCGCATACAG 
AAGGGGTGGG AGCGGGCGGC CTTCGCTTCG CTCGGCCCCA ATATCCAACA GCCAATAACA 
ACAGCCCAAC CACTGCGCCG CTGCGCGCCG CGGTGGCTTG GTGGCCGAGC GAAGCAAAGG 
CCCGTTCGGT TTCCAATCCC CTCTGTATGC GCCGAGGAGC GCAGGGTTTC GCGGATCAGG 
GCTCGCAGCT GTTTGAGCGA AGCGAGTTCT GCGAGACCCC GCGAAACCCG AGCACCGCAG 
GTTGCCCGCA GCGAAGCGGA GGGTCGCAGA CAGTGGGGTC GCCTTTTCTT TGCTTACTTT 
CTTTTGGCGA AGCAAAAGAA AGTGAGTCCG CCGCCGGGCG GACATCCCGG CTCCGGAAAA 
CAAACAAACA AAGGAGCAAG TCAATGA 

 

Protein sequence

MTVVGRFPSG GRDVRPAADL LSFASPKESK QRKGDPTVCV PPLRYGQPAV LDSGGGPQNS 
LRSNSCGPDP ASICAPRRIQ KGWERAAFAS LGPNIQQPIT TAQPLRRCAP RWLGGRAKQR 
PVRFPIPSVC AEERRVSRIR ARSCLSEASS ARPRETRAPQ VARSEAEGRR QWGRLFFAYF 
LLAKQKKVSP PPGGHPGSGK QTNKGASQ