7 homologs were found in PanDaTox collection
for query gene VIBHAR_00349 on replicon NC_009783
Organism: Vibrio harveyi ATCC BAA-1116



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009783  VIBHAR_00349  CsrB/RsmB RNA family  100 
 
 		 420 bp  833    Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_002087  hypothetical protein  95.12 
 
 		 135 bp  131  2.0000000000000002e-28  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_03245  CsrB/RsmB RNA family  90.16 
 
 		 367 bp  125  9.999999999999999e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I3217s  CsrA-regulating small RNA CsrB2  83.9 
 
 		 237 bp  125  9.999999999999999e-27  Aliivibrio salmonicida LFI1238  Bacteria  decreased coverage  0.000991946  n/a   
 
 
-
 
NC_011312  VSAL_I3216s  CsrA-regulating small RNA CsrB3  86.32 
 
 		 240 bp  97.6  2e-18  Aliivibrio salmonicida LFI1238  Bacteria  decreased coverage  0.00109836  n/a   
 
 
-
 
NC_011312  VSAL_I3142s  CsrA-regulating small RNA CsrB1  82.69 
 
 		 237 bp  56  0.000008  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.22514  n/a   
 
 
-
 
NC_009784  VIBHAR_06731    92.5 
 
 		 313 bp  48.1  0.002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>