6 homologs were found in PanDaTox collection
for query gene VIBHAR_03245 on replicon NC_009783
Organism: Vibrio harveyi ATCC BAA-1116



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009783  VIBHAR_03245  CsrB/RsmB RNA family  100 
 
 
367 bp  728    Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009783  VIBHAR_00349  CsrB/RsmB RNA family  90.16 
 
 
420 bp  125  9e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I3217s  CsrA-regulating small RNA CsrB2  85.05 
 
 
237 bp  56  0.000007  Aliivibrio salmonicida LFI1238  Bacteria  decreased coverage  0.000991946  n/a   
 
 
-
 
NC_011312  VSAL_I3216s  CsrA-regulating small RNA CsrB3  84.76 
 
 
240 bp  52  0.0001  Aliivibrio salmonicida LFI1238  Bacteria  decreased coverage  0.00109836  n/a   
 
 
-
 
NC_013456  VEA_002087  hypothetical protein  88.46 
 
 
135 bp  48.1  0.002  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I3142s  CsrA-regulating small RNA CsrB1  100 
 
 
237 bp  46.1  0.007  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.22514  n/a   
 
 
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