7 homologs were found in PanDaTox collection
for query gene TM1040_1231 on replicon NC_008044
Organism: Ruegeria sp. TM1040



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008044  TM1040_1231  hypothetical protein  100 
 
 
182 aa  375  1e-103  Ruegeria sp. TM1040  Bacteria  normal  0.354342  normal 
 
 
-
 
NC_009429  Rsph17025_3457  hypothetical protein  60.67 
 
 
196 aa  221  4.9999999999999996e-57  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.132497 
 
 
-
 
NC_009050  Rsph17029_3877  hypothetical protein  60.11 
 
 
193 aa  216  1e-55  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.65674  normal  0.847272 
 
 
-
 
NC_007494  RSP_3140  hypothetical protein  59.55 
 
 
193 aa  215  2.9999999999999998e-55  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3541  hypothetical protein  60.38 
 
 
164 aa  129  2.0000000000000002e-29  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1630  hypothetical protein  36.31 
 
 
185 aa  123  1e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.385428  n/a   
 
 
-
 
NC_007954  Sden_1479  hypothetical protein  32 
 
 
185 aa  105  4e-22  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
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