Gene Sden_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1479 
Symbol 
ID4017716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1709624 
End bp1710181 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content46% 
IMG OID637955489 
Producthypothetical protein 
Protein accessionYP_562487 
Protein GI91792836 
COG category[S] Function unknown 
COG ID[COG2258] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATGT TTGTATCAAA AGCAGCATTA CACAATGGAC TCGATTTGAT TAAAGCCTCG 
CCAACAGAGG TTGGCCAGGT GGAACACATA GTTTGTCGCC CCGATATTGG AAAGAGACAA
GTGTTAACTG AAGCCACACT GGATCTCGAG CTGGGTTTAG TGGGAGATAA TTGGCAAGCC
AGAGGCAACA GGAAAACCCC TGAAGGTTTA GCCCATCCAG ACATGCAGCT TAATTTAATG
AACGCTCGCG TGATTGGGTT AATTGCTAAG ACAAAGTCAC GCTGGCAATT AGCGGGAGAT
CAATTTTTTG TAGATTTAGA TTTGAGCCCA GAAAATCTTC CCCCAGGCAC TCAGCTGTCC
ATTGGCACTG CGGTCATTGA GATCACCGCA GAACCTCACT TAGGCTGTAA AAAATTTATT
GAACGTTTTG GTAAAGAAGC TGCCATGTTC GTTAACTCTG GAATAGGCAA ATCCCTTAAT
CTGCGTGGGG TAAATGCAAA AGTCGTCCAG CCGGGCAAGG TGAGCGTCGG CGCTAAGGTG
GCAAAACTCA GAGTCTAG
 
Protein sequence
MSMFVSKAAL HNGLDLIKAS PTEVGQVEHI VCRPDIGKRQ VLTEATLDLE LGLVGDNWQA 
RGNRKTPEGL AHPDMQLNLM NARVIGLIAK TKSRWQLAGD QFFVDLDLSP ENLPPGTQLS
IGTAVIEITA EPHLGCKKFI ERFGKEAAMF VNSGIGKSLN LRGVNAKVVQ PGKVSVGAKV
AKLRV