7 homologs were found in PanDaTox collection
for query gene Slin_R0030 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_R0030  tRNA-Tyr  100 
 
 
85 bp  168  1e-40  Spirosoma linguale DSM 74  Bacteria  normal  0.881962  normal  0.97527 
 
 
-
 
NC_004116  tRNA-Tyr-1  tRNA-Tyr  88.37 
 
 
81 bp  46.1  0.001  Streptococcus agalactiae 2603V/R  Bacteria  unclonable  0.00000135792  n/a   
 
 
-
 
NC_004116  tRNA-Tyr-2  tRNA-Tyr  88.37 
 
 
81 bp  46.1  0.001  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.875932  n/a   
 
 
-
 
NC_004116  tRNA-Tyr-3  tRNA-Tyr  88.37 
 
 
81 bp  46.1  0.001  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_t2567  tRNA-Tyr  88.37 
 
 
81 bp  46.1  0.001  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_t0090  tRNA-Tyr  88.37 
 
 
81 bp  46.1  0.001  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_t0637  tRNA-Tyr  88.37 
 
 
81 bp  46.1  0.001  Streptococcus thermophilus LMD-9  Bacteria  decreased coverage  0.000000210414  n/a   
 
 
-
 
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