7 homologs were found in PanDaTox collection
for query gene Sked_30860 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_30860  hypothetical protein  100 
 
 
163 aa  319  9.999999999999999e-87  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1997  hypothetical protein  60.76 
 
 
168 aa  182  1.0000000000000001e-45  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0325  response regulator receiver protein  48.73 
 
 
298 aa  133  9.999999999999999e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.314809  normal  0.535249 
 
 
-
 
NC_013093  Amir_2316  hypothetical protein  39.61 
 
 
158 aa  111  4.0000000000000004e-24  Actinosynnema mirum DSM 43827  Bacteria  normal  0.281388  n/a   
 
 
-
 
NC_013757  Gobs_4998  hypothetical protein  42.95 
 
 
166 aa  108  2.0000000000000002e-23  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.66191  n/a   
 
 
-
 
NC_008699  Noca_3594  hypothetical protein  42.04 
 
 
158 aa  84.3  7e-16  Nocardioides sp. JS614  Bacteria  normal  0.529193  n/a   
 
 
-
 
NC_013124  Afer_0219  response regulator receiver protein  31.06 
 
 
166 aa  40.8  0.007  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
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