3 homologs were found in PanDaTox collection
for query gene Sked_04340 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013521  Sked_04340  permease component of ABC-type sugar transporter  100 
 
 
605 aa  1129    Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.575645 
 
 
-
 
NC_012669  Bcav_0991  hypothetical protein  31.12 
 
 
565 aa  96.7  1e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.919297  decreased coverage  0.0016309 
 
 
-
 
NC_013595  Sros_5739  ABC transporter permease  32.87 
 
 
318 aa  45.8  0.002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.184804 
 
 
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