| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_04340 |
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| Symbol | |
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| ID | 8632071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 488387 |
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| End bp | 490204 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | permease component of ABC-type sugar transporter |
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| Protein accession | YP_003313234 |
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| Protein GI | 269793779 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.575645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAGA CCTCCCCCGA GCCCGTGCCC GCACCGACGG ACCGAGGGAC GGAGGGTGCT
GGCGCGCCGA GCACACCGGC CGGCACCGCA ACCCCGCAGG CAGGCGTCAC CGACGCCGAC
GGGTCCACCG GGACCGGACG CACCAGGATC AGCAACGCGC GTCTCGCCGG CTGGTTCGTG
GTCGTCGCGC TGCTCTCGCT CGCCGTGCTC CAGTACCTGC TCCCCGCGCT GCGCCTCGTG
CAGCTCGCCA CCCGGGACGC CGTCGGCTTC TTCGAGGTGT CCGGCTCGGT CGGCGCCGCG
AACTTCCGCG CGGTCCTCGA GGACGAGGGG TTCCGGGACT CCGTCGGGCG TGCGCTCGCG
TACTCGCTGA TCCCCCTCGC TGCCGCGCTC GTGCTCGGCC CGCTGGTCGC CGCCGTGGCG
AGCCGCGCCG GCCGCGCGAC CCGCCTCGTG AGCCGCGGCC TGCTCGCCGT GCCCCTGTTC
TGCGTCAGCC CCGTCGCGTA CTACGTCGCC CAGTGGGGCT CGGCGCGTGC GGGCACCATC
CAGGAGACCG GCGAGCGCGC GCAGGCCGTC GGGACCACCC AGGCCGAGCT CGTGATCATC
GGCGGGCTCT CCGTCGTCGG GATCGTCGCG GCGCTCTCCG CGACCCTCTA CCTCGCAGCG
ATGCGACGCT CCGCACGCTC CCGCGCGGGG TGGGCGGCCT CTGGGGTCGT GACCGCCGTC
GTCATCCTGG CCGTGACCAC CCTCAGCCTC ATGGTCACCA CGGCCCCGCT GCTGCTCACC
GCCGACCTCT CGGCGGGCGG GACCACCACC CCGGGGATGC TCGTCTACGA GTGGGTGTTC
ATCCGCTACG ACCTGCCGAT CGGCAGCGCC GCCCTCGCCC TGCTGCTCGT CCCGACGGCT
CTCGTGGGCG TCGTGCTCGT CGCCCTCGTG CTCGCCGTCC GGACCCGCGT CGAGATCGTG
CCCCGCGGTG TCGCGGCGGG GTCTGGTGCT GAGGTAGGTG CTGCGAAGGG CGCGACGGCC
GATCGCGCGA CCACCGTCGA GGCCGGTGTC GTGCCCGCTG ACGCCGCGTC TGCCCGCTCA
CGGCTCCTGT CGGTGCTCTC CGTGGTGCTG GTGTCGGCGC TCGCGGTCGG GACTGTCGTG
CTGGGGTGGT CGTGGCTGCG AGGGGTCCTC GAGACGGACG TCGTCCCGGG GATCGACGCC
GGGACGCTGC AGACCACCAC GTGGGTGTCG TCGGTCCTCA CCGGTCTTGT GGTCGTGGCG
GTCGCCGTGG TCGGCGGCTT CGGCATCGGG TTCTTGCGCC CCGCCGGGCG GCGCAGCGAG
TGGTTGCTCC TCGCCTTCGC GCCGTTCCTG CTGGTCGGGA CCACGTCGCT GCTGCCCGCG
CTGTTCGAGG ACGGCGTGGA CGCCGGGACC CTCGGGACGC TGCGCGGGCT CGTGTCACCG
CTGTGGCTCA GCGTGCCGCT GCTCGTGCTG TTCACGCTGG TCTTCGCGGG CGTCCGTCGC
AGCCGCGACG CCGGTCAGGC GGACGCGGTG CGCTCTGCGC TGGTGCCGGT CCTCGGCCTC
GTCGGGCTCA GCGGGCTCGT CACGGCGTGG GTGCACGCCC AGCAGTACCT CTGGCCGCTC
GTCATCTCTT ACGGCTCGAA CACCTCGACC CCGATCCTCG TCCGGGTCGC AGCCACGCCC
AGCGCAGAGC TCGAGCCTGT GCCCTTCGGG CTCGTGGCGC CGCTCGGGGT GCTCGTCGTC
TTCGTGCTGC TCGGCGCGCT GTGCCTTGTC GCCACTGACC GGATCGCACT GCGGGCAGGG
CGCCGGTCTG CAGACTAG
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| Protein sequence | MDQTSPEPVP APTDRGTEGA GAPSTPAGTA TPQAGVTDAD GSTGTGRTRI SNARLAGWFV
VVALLSLAVL QYLLPALRLV QLATRDAVGF FEVSGSVGAA NFRAVLEDEG FRDSVGRALA
YSLIPLAAAL VLGPLVAAVA SRAGRATRLV SRGLLAVPLF CVSPVAYYVA QWGSARAGTI
QETGERAQAV GTTQAELVII GGLSVVGIVA ALSATLYLAA MRRSARSRAG WAASGVVTAV
VILAVTTLSL MVTTAPLLLT ADLSAGGTTT PGMLVYEWVF IRYDLPIGSA ALALLLVPTA
LVGVVLVALV LAVRTRVEIV PRGVAAGSGA EVGAAKGATA DRATTVEAGV VPADAASARS
RLLSVLSVVL VSALAVGTVV LGWSWLRGVL ETDVVPGIDA GTLQTTTWVS SVLTGLVVVA
VAVVGGFGIG FLRPAGRRSE WLLLAFAPFL LVGTTSLLPA LFEDGVDAGT LGTLRGLVSP
LWLSVPLLVL FTLVFAGVRR SRDAGQADAV RSALVPVLGL VGLSGLVTAW VHAQQYLWPL
VISYGSNTST PILVRVAATP SAELEPVPFG LVAPLGVLVV FVLLGALCLV ATDRIALRAG
RRSAD
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