5 homologs were found in PanDaTox collection
for query gene Shewmr4_1954 on replicon NC_008321
Organism: Shewanella sp. MR-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008321  Shewmr4_1954  hypothetical protein  100 
 
 
127 aa  257  5.0000000000000005e-68  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000692491  normal  0.346497 
 
 
-
 
NC_008322  Shewmr7_2022  hypothetical protein  96.85 
 
 
127 aa  248  2e-65  Shewanella sp. MR-7  Bacteria  decreased coverage  0.0000263083  normal  0.117639 
 
 
-
 
NC_004347  SO_2298  hypothetical protein  47.67 
 
 
76 aa  71.2  0.000000000004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_2183  hypothetical protein  36.78 
 
 
77 aa  44.7  0.0005  Shewanella baltica OS223  Bacteria  hitchhiker  0.0000926312  normal  0.0186352 
 
 
-
 
NC_009997  Sbal195_2331  hypothetical protein  36.78 
 
 
77 aa  43.9  0.0007  Shewanella baltica OS195  Bacteria  hitchhiker  0.00709658  normal 
 
 
-
 
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