Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1954 |
Symbol | |
ID | 4252527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 2331122 |
End bp | 2331505 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638118566 |
Product | hypothetical protein |
Protein accession | YP_734084 |
Protein GI | 113970291 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000692491 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.346497 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCAGT CATTTAACGC CCCTACGCTA TGCGCGTTAA ATGATTGCGG GTGGGTTGGA GGTTTACCAC CACGCATACC GCGCAGTCGC ATCGCTGTAA ATAATGAAGC CAAAGGAGTT GGTATGTTCA CAAGTATCCT ATTGACGGTT GCACTTAGCC AAGTCGCCCA GAACCCAATC CCAGTTAGCC CCACGGCACT CACTCAACCT GAACCCCGAG CGGTTCAACG TCAAGCGGTG CAATTTGACG CCATTGGTTT GCAGGCCGAT ATTCACGCCG AGCTTTTGCT GCAGATAGAA CAGCTATCGC AGGCCATAAG TGACAATATA GAGGAAGGCA TATTACCGAC TGCGCCTGTC GAACTGATGA CAGTAAAAGA TTGA
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Protein sequence | MWQSFNAPTL CALNDCGWVG GLPPRIPRSR IAVNNEAKGV GMFTSILLTV ALSQVAQNPI PVSPTALTQP EPRAVQRQAV QFDAIGLQAD IHAELLLQIE QLSQAISDNI EEGILPTAPV ELMTVKD
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