Gene Shewmr4_1954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1954 
Symbol 
ID4252527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp2331122 
End bp2331505 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content51% 
IMG OID638118566 
Producthypothetical protein 
Protein accessionYP_734084 
Protein GI113970291 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000692491 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.346497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCAGT CATTTAACGC CCCTACGCTA TGCGCGTTAA ATGATTGCGG GTGGGTTGGA 
GGTTTACCAC CACGCATACC GCGCAGTCGC ATCGCTGTAA ATAATGAAGC CAAAGGAGTT
GGTATGTTCA CAAGTATCCT ATTGACGGTT GCACTTAGCC AAGTCGCCCA GAACCCAATC
CCAGTTAGCC CCACGGCACT CACTCAACCT GAACCCCGAG CGGTTCAACG TCAAGCGGTG
CAATTTGACG CCATTGGTTT GCAGGCCGAT ATTCACGCCG AGCTTTTGCT GCAGATAGAA
CAGCTATCGC AGGCCATAAG TGACAATATA GAGGAAGGCA TATTACCGAC TGCGCCTGTC
GAACTGATGA CAGTAAAAGA TTGA
 
Protein sequence
MWQSFNAPTL CALNDCGWVG GLPPRIPRSR IAVNNEAKGV GMFTSILLTV ALSQVAQNPI 
PVSPTALTQP EPRAVQRQAV QFDAIGLQAD IHAELLLQIE QLSQAISDNI EEGILPTAPV
ELMTVKD