6 homologs were found in PanDaTox collection
for query gene Shewana3_4272 on replicon NC_008573
Organism: Shewanella sp. ANA-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008573  Shewana3_4272  hypothetical protein  100 
 
 
1776 aa  3628    Shewanella sp. ANA-3  Bacteria  normal  0.335477  normal 
 
 
-
 
NC_009140  SNSL254_pSN254_0189  type IV conjugative transfer system protein TraG  20.2 
 
 
1204 aa  87.4  0.000000000000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.0000111366 
 
 
-
 
NC_011083  SeHA_C1594  sex pilus assembly  20.94 
 
 
1145 aa  74.3  0.00000000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_9097  hypothetical protein  39.57 
 
 
3151 aa  52  0.00009  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008741  Dvul_3042  patatin  29.8 
 
 
586 aa  47.8  0.002  Desulfovibrio vulgaris DP4  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1157  transcriptional regulator  30.99 
 
 
687 aa  46.2  0.006  Anabaena variabilis ATCC 29413  Bacteria  normal  0.033832  normal 
 
 
-
 
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