| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1157 |
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| Symbol | |
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| ID | 3683352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1415938 |
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| End bp | 1418001 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637716493 |
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| Product | transcriptional regulator |
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| Protein accession | YP_321676 |
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| Protein GI | 75907380 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.033832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACCT TTGATGAACT TTGGGAACTC CTTACCACCC AAGACGAAAG TGTAGAAATC
GAAGCCAAAA AAGGCTCAGA AGTTGGTAAA AGTTGCTTAA CTACAATCAG TGCATTTGCT
AACGAACCTG GATTAAGAGG CGGATATTTG ATTTTGGGAA TCAAAGCACC GGAAGATAGT
GATAGCAATC AGTATGAAAT AGAAGGGCTT GAAGATCCTG ATAAGATCCA GAGAGATTTA
ACCAGCCATT GCAGCCAAAA ATTTAATATT ATTATTCGTC CCCAAATCCA GTTAGCTACT
AAAGAAGGCA AAACTGTCTT AATTGCATAT ATTTCTGAAG CTCAACCCAC AGAAAAGCCT
GTATATATTG TGAGTACAGG ACTGCCAAAG GGAGCATATA GGCGTATTTC TTCCACAGAT
CAACGTTGTA CTGATGTAGA TATCAAACGT CTTTATCAAG AAAATAGTTT TTCTAGCTAC
GATACAACTC CAATTTTAGA AGCAACCCTA GAAGATTTAG AACCCCAAGC TATTAACGCC
TATAGACAAG CACGAGCGAA AATTAAACCT AATGCTCCTG AATTGAACTA TTCAGATCAA
GATTTACTGT ATTCTTTAAA TGTCATCGTT AAACATCAAA ATCACTACTG TCCAACAATT
GCTGGATTAA TCTTGTTTGG CAATGCGATC GCTCTACGGC GTTATTGTCC TCTGCATCGT
GTAGATTATA TTTTAATTGA AGGTACAGAA TGGATCACTG ACTATCAAGA TAGATATCAG
ACTCTTGAAA TCCGTGAACC ACTACTGTTG GCTATTCCTA GACTGGTAAC AAATGTTCTC
AATGACTTAC CTACAAGATT TGGACTAGCT GAGGATAGTG TTCAACGCAG TGAAATTCCT
CTCATTCCTC GTAAAGTTAT TAGAGAGGCA ATAGTTAATG CTGTCATGCA CCGAGACTAT
AGCCAACGTA GTCCTATCCA GATTATTAAG TATTCTAACC GTCTAGAAAT CCGCAATCCT
GGTTATTCCC TGAAAAATCT TAGCCGAGAA ACTTTAGGCG AACCTGGTTC TGTGATTCGT
AATGAAGCGA TCGCCGCAGT GCTTCATGAA ACAGGATTCG CTGAAACTAA AGGATCAGGT
ATTCGAGTCA TGTTGGAAGC TATGCTAGAA GCTAATTTGA GCTTACCATC TTTTGAATCT
AATCGTAACT TAGATAAATT TAATGTTACT CTTTTTTCTC ATAATCTTTT TGATACAGAA
GCCCTACAAT GGTTATCACA ATTCAGAATC CATAATCTGA CTGATGAAGA AGCAAAAATA
TTAGTTGTTT TGAGAGAAAA AGGAACAATT AATAATGCCA TTTCTCGTTT AATCAATGGT
GTAGATACCC TAAAGGCTAG TCAAAACTTA AAAAGATTGA GGGATATTGG TTTAATTGCA
TCACACGGAA AAAGTTCAGC AACTTATTAT ACTCTTAACC CTGAGTTTCA GTCTAAAGAA
CAATCCCAAG TAGATAAATT TAATCAAGAC AGTAGTACAG CAGAGGGGGA AACCTTATCA
AGACAGTCCT CAACTCCTAG TCAAGACAGT AGTACAGTAG AGGGGGAAAC CTTATCAAGA
CAGTCCTCAA CTCCTAGTCA AGACAGTAGT ACAGTAGAGG GGGAAACCTT ATCAAGACAG
TCCTCAACTC CTAGTCAAGA CAGTAGTACA GTAGAGGGGG AAACCTTATC AAGACAGTCC
TCAACCCTTA GTCAAGACAG TAGCAATTTT ATACCTGAAC AACTTACTCT TGAATTATTT
CCTGATACGA GAAAAGCATC TTTACAAGAA AAAATAGGGA AGATTGGTAG TCGAACAAAG
CATGAGGAAA TTAAAAATAT CATCCTTGAA TTATGTGAGA TACAACCTTA CTCCTCTAGT
GAATTAGCCT CTTTATTAAA CCGAGAACGA AAATATCTGC TACATAAACA TTTAAAACCT
TTAATTGATG AGGGTTTGCT TGAATATACA AATCCAGAAA AACCCAATGA CCCTCATCAA
ACTTACCGCA CGACTCGAAA ATAA
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| Protein sequence | MLTFDELWEL LTTQDESVEI EAKKGSEVGK SCLTTISAFA NEPGLRGGYL ILGIKAPEDS
DSNQYEIEGL EDPDKIQRDL TSHCSQKFNI IIRPQIQLAT KEGKTVLIAY ISEAQPTEKP
VYIVSTGLPK GAYRRISSTD QRCTDVDIKR LYQENSFSSY DTTPILEATL EDLEPQAINA
YRQARAKIKP NAPELNYSDQ DLLYSLNVIV KHQNHYCPTI AGLILFGNAI ALRRYCPLHR
VDYILIEGTE WITDYQDRYQ TLEIREPLLL AIPRLVTNVL NDLPTRFGLA EDSVQRSEIP
LIPRKVIREA IVNAVMHRDY SQRSPIQIIK YSNRLEIRNP GYSLKNLSRE TLGEPGSVIR
NEAIAAVLHE TGFAETKGSG IRVMLEAMLE ANLSLPSFES NRNLDKFNVT LFSHNLFDTE
ALQWLSQFRI HNLTDEEAKI LVVLREKGTI NNAISRLING VDTLKASQNL KRLRDIGLIA
SHGKSSATYY TLNPEFQSKE QSQVDKFNQD SSTAEGETLS RQSSTPSQDS STVEGETLSR
QSSTPSQDSS TVEGETLSRQ SSTPSQDSST VEGETLSRQS STLSQDSSNF IPEQLTLELF
PDTRKASLQE KIGKIGSRTK HEEIKNIILE LCEIQPYSSS ELASLLNRER KYLLHKHLKP
LIDEGLLEYT NPEKPNDPHQ TYRTTRK
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