16 homologs were found in PanDaTox collection
for query gene Sfri_1657 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008345  Sfri_1657  hypothetical protein  100 
 
 
122 aa  256  5.0000000000000005e-68  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0789823  n/a   
 
 
-
 
NC_009997  Sbal195_0777  hypothetical protein  67.57 
 
 
117 aa  164  2.9999999999999998e-40  Shewanella baltica OS195  Bacteria  normal  0.775621  hitchhiker  0.00416665 
 
 
-
 
NC_009665  Shew185_0747  hypothetical protein  66.67 
 
 
117 aa  163  6.9999999999999995e-40  Shewanella baltica OS185  Bacteria  normal  0.259347  n/a   
 
 
-
 
NC_007954  Sden_3259  hypothetical protein  68.87 
 
 
119 aa  159  1e-38  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00195671  n/a   
 
 
-
 
NC_009052  Sbal_3608  hypothetical protein  69.52 
 
 
105 aa  159  1e-38  Shewanella baltica OS155  Bacteria  hitchhiker  0.00133463  n/a   
 
 
-
 
NC_011663  Sbal223_0774  hypothetical protein  67.29 
 
 
125 aa  156  1e-37  Shewanella baltica OS223  Bacteria  hitchhiker  0.0098879  normal  0.248143 
 
 
-
 
NC_009665  Shew185_1863  hypothetical protein  56.07 
 
 
119 aa  133  7.000000000000001e-31  Shewanella baltica OS185  Bacteria  hitchhiker  0.000174974  n/a   
 
 
-
 
NC_009665  Shew185_1975  hypothetical protein  56.07 
 
 
119 aa  133  7.000000000000001e-31  Shewanella baltica OS185  Bacteria  hitchhiker  0.00750912  n/a   
 
 
-
 
NC_009665  Shew185_2553  hypothetical protein  56.07 
 
 
119 aa  133  7.000000000000001e-31  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1980  hypothetical protein  56.07 
 
 
119 aa  133  7.000000000000001e-31  Shewanella baltica OS195  Bacteria  hitchhiker  0.00038231  normal  0.0462481 
 
 
-
 
NC_009997  Sbal195_3389  hypothetical protein  56.07 
 
 
119 aa  133  7.000000000000001e-31  Shewanella baltica OS195  Bacteria  normal  hitchhiker  0.00321338 
 
 
-
 
NC_009997  Sbal195_2030  hypothetical protein  55.14 
 
 
119 aa  132  1.9999999999999998e-30  Shewanella baltica OS195  Bacteria  normal  0.0448496  normal  0.18855 
 
 
-
 
NC_009665  Shew185_3361  hypothetical protein  55.14 
 
 
119 aa  131  3e-30  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3252  hypothetical protein  55.14 
 
 
119 aa  130  3.9999999999999996e-30  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3485  hypothetical protein  55.14 
 
 
119 aa  130  3.9999999999999996e-30  Shewanella baltica OS195  Bacteria  normal  0.123113  hitchhiker  0.00059413 
 
 
-
 
NC_009997  Sbal195_1719  phage integrase family protein  66.67 
 
 
231 aa  52  0.000003  Shewanella baltica OS195  Bacteria  normal  normal  0.592046 
 
 
-
 
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