4 homologs were found in PanDaTox collection
for query gene Sden_1688 on replicon NC_007954
Organism: Shewanella denitrificans OS217



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007954  Sden_1688  hypothetical protein  100 
 
 
184 aa  379  1e-104  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A0302  antitermination protein Q  25.7 
 
 
207 aa  48.1  0.00007  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_10027  late gene regulator  25.7 
 
 
207 aa  47.4  0.0001  Escherichia coli BL21(DE3)  Bacteria  decreased coverage  0.00412931  n/a   
 
 
-
 
NC_012892  B21_00725  hypothetical protein  25.7 
 
 
207 aa  47.4  0.0001  Escherichia coli BL21  Bacteria  decreased coverage  0.00315899  n/a   
 
 
-
 
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