9 homologs were found in PanDaTox collection
for query gene Sala_2218 on replicon NC_008048
Organism: Sphingopyxis alaskensis RB2256



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008048  Sala_2218  hypothetical protein  100 
 
 
190 aa  388  1e-107  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0685303  normal  0.338701 
 
 
-
 
NC_007406  Nwi_0542  hypothetical protein  42.86 
 
 
216 aa  132  5e-30  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.774807 
 
 
-
 
NC_009485  BBta_1061  hypothetical protein  37.1 
 
 
216 aa  86.3  2e-16  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.569869  normal 
 
 
-
 
NC_008044  TM1040_0261  hypothetical protein  31.85 
 
 
209 aa  75.9  0.0000000000003  Ruegeria sp. TM1040  Bacteria  normal  normal  0.652436 
 
 
-
 
NC_013061  Phep_4042  FkbM family methyltransferase  28.8 
 
 
214 aa  45.8  0.0004  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.710867 
 
 
-
 
NC_008312  Tery_1485  hypothetical protein  24.09 
 
 
392 aa  45.4  0.0005  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0609062 
 
 
-
 
NC_010571  Oter_1767  FkbM family methyltransferase  25.71 
 
 
229 aa  43.9  0.001  Opitutus terrae PB90-1  Bacteria  normal  0.625501  normal 
 
 
-
 
NC_008312  Tery_3754  FkbM family methyltransferase  23.08 
 
 
569 aa  41.6  0.006  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.909062 
 
 
-
 
NC_011891  A2cp1_0644  FkbM family methyltransferase  32.03 
 
 
218 aa  41.2  0.01  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>