| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2218 |
|---|
| Symbol | |
|---|
| ID | 4080289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2328791 |
|---|
| End bp | 2329363 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638010596 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_617260 |
|---|
| Protein GI | 103487699 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0685303 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.338701 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGGGGA CCATGCAGCC ACATATGACC GCCGCCGAGG TGCGGCATTT CGAATTGCAG
CTGGCGGGGC TGGGCTCGCT GCTGGAGTTC GGCTGCGGCG GCAGCACGCT GGTCGCGGCG
CGGCAGGTGC GACGCATCGT CAGCGTCGAC AGCGACCCCG CCTGGCTCGC GCGCGTGCGG
GCGGAGGTCG CCGCCGAGCC CGTCGACTTC ACCCCCGTCC ATATCGACAT CGGCCCCGTC
GGCGAATGGG GCTATCCGAC AGGCGAAAGC CGCCTTCGCG ACTGGCCGCG CTATCACACA
CAGGTCTGGC GCGGCATGGG GGGCAGCCCC GATGCGGTGC TGATCGACGG GCGCTTTCGC
GTCGCCTGCC TGCTCCAGGC GATCATCCAC TGCAAACCCG ACTGCGTCCT GCTGTTCCAC
GATTTTACCG GCCGGCCGCA TTATCATGCC GTGCTGCGCC ATGTGGACGT GCTCACGCGC
GTCGATACGC TGGCGGTGAT GCGCGTCAGG CAGCAGGTCG ATGGCAAGGC GGTGCTGCAC
GACCTGTTCG ACCATTATCT GAACCCCGAT TGA
|
|---|
| Protein sequence | MEGTMQPHMT AAEVRHFELQ LAGLGSLLEF GCGGSTLVAA RQVRRIVSVD SDPAWLARVR
AEVAAEPVDF TPVHIDIGPV GEWGYPTGES RLRDWPRYHT QVWRGMGGSP DAVLIDGRFR
VACLLQAIIH CKPDCVLLFH DFTGRPHYHA VLRHVDVLTR VDTLAVMRVR QQVDGKAVLH
DLFDHYLNPD
|
|---|
| |