9 homologs were found in PanDaTox collection
for query gene SO_1135 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004347  SO_1135  hypothetical protein  100 
 
 
282 aa  586  1e-166  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008576  Mmc1_1068  hypothetical protein  35.02 
 
 
279 aa  175  9e-43  Magnetococcus sp. MC-1  Bacteria  normal  0.30522  normal  0.456867 
 
 
-
 
NC_009654  Mmwyl1_0323  hypothetical protein  26.97 
 
 
271 aa  58.9  0.0000001  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_1634  hypothetical protein  27.64 
 
 
134 aa  47  0.0004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_1364  hypothetical protein  29.03 
 
 
277 aa  46.2  0.0005  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.231109 
 
 
-
 
NC_013061  Phep_2277  hypothetical protein  26.15 
 
 
127 aa  44.7  0.002  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.00216052 
 
 
-
 
NC_013037  Dfer_0147  hypothetical protein  23.44 
 
 
128 aa  43.5  0.003  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.416427 
 
 
-
 
NC_013132  Cpin_6309  hypothetical protein  25.6 
 
 
127 aa  42.7  0.006  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.559851 
 
 
-
 
NC_013595  Sros_1968  hypothetical protein  29.27 
 
 
125 aa  42.4  0.009  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
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