8 homologs were found in PanDaTox collection
for query gene Rpic_0140 on replicon NC_010682
Organism: Ralstonia pickettii 12J



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010682  Rpic_0140  protein of unknown function DUF883, ElaB  100 
 
 
142 aa  275  1e-73  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0148  protein of unknown function DUF883 ElaB  88.73 
 
 
141 aa  238  1e-62  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0125  hypothetical protein  37.12 
 
 
139 aa  72.8  0.000000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0094  hypothetical protein  37.06 
 
 
144 aa  70.1  0.00000000001  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3634  protein of unknown function DUF883, ElaB  28.42 
 
 
104 aa  44.7  0.0004  Pseudomonas putida F1  Bacteria  normal  normal  0.889919 
 
 
-
 
NC_002947  PP_2105  hypothetical protein  27.37 
 
 
104 aa  41.6  0.003  Pseudomonas putida KT2440  Bacteria  normal  0.178666  normal  0.0591454 
 
 
-
 
NC_010501  PputW619_1624  protein of unknown function DUF883 ElaB  27.37 
 
 
104 aa  42  0.003  Pseudomonas putida W619  Bacteria  normal  normal  0.119458 
 
 
-
 
NC_007492  Pfl01_3969  vesicle-fusing ATPase  32.29 
 
 
104 aa  41.2  0.004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.938878  normal 
 
 
-
 
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