5 homologs were found in PanDaTox collection
for query gene Rpic12D_4897 on replicon NC_012855
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012855  Rpic12D_4897  hypothetical protein  100 
 
 
523 aa  1074    Ralstonia pickettii 12D  Bacteria  normal  normal  0.131606 
 
 
-
 
NC_007901  Rfer_4370  hypothetical protein  25.35 
 
 
584 aa  57.4  0.0000007  Rhodoferax ferrireducens T118  Bacteria  n/a    n/a   
 
 
-
 
NC_007949  Bpro_5003  hypothetical protein  30.84 
 
 
123 aa  51.6  0.00004  Polaromonas sp. JS666  Bacteria  normal  normal  0.143816 
 
 
-
 
NC_011992  Dtpsy_2125  hypothetical protein  48.94 
 
 
77 aa  44.3  0.006  Acidovorax ebreus TPSY  Bacteria  normal  0.180582  n/a   
 
 
-
 
NC_008782  Ajs_1590  hypothetical protein  50 
 
 
166 aa  43.5  0.01  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
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