Gene Rpic12D_4897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4897 
Symbol 
ID8017612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp202624 
End bp204195 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content60% 
IMG OID644828585 
Producthypothetical protein 
Protein accessionYP_002979785 
Protein GI241589760 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.131606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA AACAGGTCGA GAATTTTGAG CAAGGTGGTG CACGCAATGG TGCACAAGGT 
CGAGGCGGGG AAACGTCTGG AGCCAGTGCG CAGCACCGAT CGAACGTGCC CCCGTTTCGG
CAGACCGCTG TTACCGGGGA CTGGCTTGCC GAGGACCAAG ACATTCCGGC GTACACCAAC
GGGGTCCTCT GGAACGGATG GCAGCAGCCG CTGTTCCCAA CGTCGTCGGT CCGGTTGATT
GCACAGCTGA TGCCCGCAGA AGTCGCTTTC GATGAGGCTG CTGGTGTGGT GCGTGTCACT
GACGAGCATC AGGAGCCCGC CGCCGTAGTC GAGTCCTCGA TGGAGCAAAT CGAAGTCGAT
GGCAAGCTCG TCGACGTGTT CTGCGTGGGC TCTGGCTGGT GCTGGGAACT TGCTACCCCT
GAGCAGGGGG CTTCGGAGCG CGACAAGGCG CGTGCTGTCT TGTCTAGATA CCGGTACCAG
CGTGTCGCGG ATCTGTACGA CCAGGACACC GAGTTTGCGA ACGCGCTGCG CGTGCTCGCT
GGCACGGAGT TCGAATATCC GGACTACTCA TACCTTTTGG TGCGACAAGC GATCTCGAAA
GCGGATCGGC AGTTTGCATC GGGTACGGTG ATCCAGGGTA CGCAACAGAT GCAGCAAGCA
GAAACGGCGG AGGCCCGAAC CATGGAGGAG GGCAAGGCGC TGCTCGACCA GGCGCTTGCC
GCTTTCGGTG CGACACGCAC CCCGTGGGAG GAGCGGGGTC GGTATGTGAG TCCGTGGGAA
TACTGTTTGG TTTCGCTTCC AAACGTATCC CAGGCCGTCA GTGTGGGCGT TTCTGCGGGA
GGGGTGGTTT CCGTCTCAGG AGTGCCTTTC TCACCGAATG GGCGCAAGCT CAACGTATGG
GTGGAGGAAA TCCTGGCGTC TCTCGTGGCA TGGCGAGATG CAAAGGCGAA AGGGAACCCT
CCGCTTGAGT TCGTGCGAAC GGATCGCGAC AACTGTCGTG TCTACTACAG ACATGGCGCC
AAGCTGTACG CCTTCCAGAA GGAGCGCAGG GACCACTTCC AGCTGTTCGA ATGCACTCAG
GACGGTGAAC CGATGTACCA AGTTCCGCTG AAGCCAGTCG ACCAAAAGCC GGCTAATTAT
CCGGAATTCG GGCGCTGGGT GGACCTTGAA CTCGCGCAGA GCTTCGGAAG CATTGCGGGC
TTGTCTGCAG TTGCGCCGGC GCCGGAATCG CACGATCAGG CTTTGGTCAA TTGCTTGTCC
GATCTGGTGC AGGCGGTGGA ATTCTTGCCG CTTGGTGTCC GCGGCATCAA AGCCGTTCAT
GCCGCCAAGG TCTCCCTGGG CAAGGTTCCG GGCACGGGCT ACTCCATCCA TCAACCAGAA
GCCCCGGCTG AACTGGACGG GAAGCCGACG GATCAACAGT CGTCCGCAAT GGCTGTGGCT
GAGGCGGTGT TTGAAGCTTG TCAGCGCCAG GTTGAAAAAG GCCGGTCGCT TAGCAATCTC
AACCTCAGCG TCATCGCCGA ACGGGCAATT TCGGAGGCAA GTTCTGCTCT GAAGACCGGC
CCGGGCAAGT GA
 
Protein sequence
MNKKQVENFE QGGARNGAQG RGGETSGASA QHRSNVPPFR QTAVTGDWLA EDQDIPAYTN 
GVLWNGWQQP LFPTSSVRLI AQLMPAEVAF DEAAGVVRVT DEHQEPAAVV ESSMEQIEVD
GKLVDVFCVG SGWCWELATP EQGASERDKA RAVLSRYRYQ RVADLYDQDT EFANALRVLA
GTEFEYPDYS YLLVRQAISK ADRQFASGTV IQGTQQMQQA ETAEARTMEE GKALLDQALA
AFGATRTPWE ERGRYVSPWE YCLVSLPNVS QAVSVGVSAG GVVSVSGVPF SPNGRKLNVW
VEEILASLVA WRDAKAKGNP PLEFVRTDRD NCRVYYRHGA KLYAFQKERR DHFQLFECTQ
DGEPMYQVPL KPVDQKPANY PEFGRWVDLE LAQSFGSIAG LSAVAPAPES HDQALVNCLS
DLVQAVEFLP LGVRGIKAVH AAKVSLGKVP GTGYSIHQPE APAELDGKPT DQQSSAMAVA
EAVFEACQRQ VEKGRSLSNL NLSVIAERAI SEASSALKTG PGK