7 homologs were found in PanDaTox collection
for query gene Rpic12D_2518 on replicon NC_012856
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012856  Rpic12D_2518  hypothetical protein  100 
 
 
284 aa  584  1e-166  Ralstonia pickettii 12D  Bacteria  normal  normal  0.182989 
 
 
-
 
NC_010683  Rpic_4975  hypothetical protein  86.27 
 
 
290 aa  502  1e-141  Ralstonia pickettii 12J  Bacteria  normal  normal  0.194568 
 
 
-
 
NC_007908  Rfer_1071  hypothetical protein  51.13 
 
 
281 aa  289  4e-77  Rhodoferax ferrireducens T118  Bacteria  normal  0.969787  n/a   
 
 
-
 
NC_011992  Dtpsy_2166  hypothetical protein  50.56 
 
 
281 aa  288  8e-77  Acidovorax ebreus TPSY  Bacteria  normal  0.0146351  n/a   
 
 
-
 
NC_010681  Bphyt_3722  hypothetical protein  37.9 
 
 
259 aa  179  4e-44  Burkholderia phytofirmans PsJN  Bacteria  normal  0.866957  normal  0.716475 
 
 
-
 
NC_010086  Bmul_4727  hypothetical protein  33.2 
 
 
317 aa  141  9.999999999999999e-33  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_1920  hypothetical protein  41.71 
 
 
209 aa  133  3e-30  Sinorhizobium medicae WSM419  Bacteria  normal  0.244464  normal 
 
 
-
 
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