Gene Smed_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1920 
Symbol 
ID5322778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1977344 
End bp1977973 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content59% 
IMG OID640790857 
Producthypothetical protein 
Protein accessionYP_001327589 
Protein GI150397122 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.244464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAGC TTGTTGAAGG GGATGACGGG CTCCCTGCTG AGGACGTCGG GCCATGGGCT 
ATTGAAAAAT ACAACTATCT CTGTCGGTAC GTTGACATCT CGCGCGGTGC TCGCGGTAAG
TTCATAGGAC CAGGCAAGGC CGGCGCCACT TACCTTGACC TTTTCTGTGG CCCAGGGCGA
GCGAAGGTGA GGAACGGCGA ATTCACCGAC GGCGGCTGTG TTGCTGCCTG GCGCAAGAGC
GTTGCTGGCG GGGGGCCGTT TTCTCAGGTC TTCATTGCCG ACATTGACGA GGTCCGCTTG
AATGCCGCGG CGGAACGCCT GAAGCAGGCC GGCGCACCGG TCACAGCCTT TCACGGGCCG
GCCCTGCAGA CGGTTGAAAG TATTCTCAAG CGACTAGATC CGTATGGGCT TCACTTCGCG
TTCCTCGACC CGTTTAGCCT CGGGGTCCTC GACTTCCGGA TTTTCCAGAA GCTGGCGAAA
AGGAAGCGCA TGGATATCCT TGTGCATCTC AGCAAAATGG ACCTTCAGCG CAATCTTGGG
CGTAACTTGG CAGCCGACGT TTCAGCCTTC GATGCATTCG CTCCCGGTTG GAGGAGCGAT
CGACGCCGCC CAAGGCCAGC AAGGCATTAG
 
Protein sequence
MGELVEGDDG LPAEDVGPWA IEKYNYLCRY VDISRGARGK FIGPGKAGAT YLDLFCGPGR 
AKVRNGEFTD GGCVAAWRKS VAGGGPFSQV FIADIDEVRL NAAAERLKQA GAPVTAFHGP
ALQTVESILK RLDPYGLHFA FLDPFSLGVL DFRIFQKLAK RKRMDILVHL SKMDLQRNLG
RNLAADVSAF DAFAPGWRSD RRRPRPARH