9 homologs were found in PanDaTox collection
for query gene RoseRS_4403 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009523  RoseRS_4403  SH3 type 3 domain-containing protein  100 
 
 		 353 aa  692    Roseiflexus sp. RS-1  Bacteria  normal  0.522087  normal  1 
 
 
-
 
NC_009767  Rcas_0746  SH3 type 3 domain-containing protein  38.3 
 
 		 258 aa  98.6  2e-19  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.507034  normal  0.488418 
 
 
-
 
NC_009767  Rcas_1592  serine/threonine protein kinase  27.93 
 
 		 471 aa  50.8  0.00004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.400911  normal  1 
 
 
-
 
NC_009674  Bcer98_0610  peptidase M23B  27.27 
 
 		 383 aa  48.9  0.0001  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.000000136568  n/a   
 
 
-
 
NC_011369  Rleg2_2752  protein of unknown function DUF1236  37.31 
 
 		 205 aa  45.8  0.001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.348159  normal  1 
 
 
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NC_012850  Rleg_3015  protein of unknown function DUF1236  37.31 
 
 		 205 aa  45.4  0.001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU0715  hypothetical protein  36.17 
 
 		 269 aa  43.9  0.004  Geobacter sulfurreducens PCA  Bacteria  normal  0.264289  n/a   
 
 
-
 
NC_013216  Dtox_3626  N-acetylmuramoyl-L-alanine amidase  34.85 
 
 		 476 aa  43.9  0.004  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.0000000133632  normal  0.124331 
 
 
-
 
NC_009523  RoseRS_1259  protein kinase  28.67 
 
 		 463 aa  42.7  0.009  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00720505  decreased coverage  0.00014415 
 
 
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