4 homologs were found in PanDaTox collection
for query gene RoseRS_3993 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_3993  PKD domain-containing protein  100 
 
 
682 aa  1364    Roseiflexus sp. RS-1  Bacteria  normal  0.314301  normal 
 
 
-
 
NC_009767  Rcas_3348  PKD domain-containing protein  71.45 
 
 
681 aa  969    Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2669  hypothetical protein  30.15 
 
 
358 aa  129  1.0000000000000001e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  0.076734  normal 
 
 
-
 
NC_008346  Swol_0163  hypothetical protein  25.09 
 
 
1056 aa  58.5  0.0000004  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.000567499  n/a   
 
 
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