| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3993 |
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| Symbol | |
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| ID | 5210976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4996052 |
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| End bp | 4998100 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640597584 |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_001278290 |
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| Protein GI | 148658085 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.314301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCACC ATACTATGCT GGCGCTGATC CTGGTGCTGC TGCCCGTATT CCTGGCAACG
CACGACTATC CGGCAGCGCG CGCCGATCTG TCGTCTCCTT CGTCGGACAG GCGAGTCTAT
CTGCCGCTGA TTACGCGCCC TGCGACGATC GATCTCGTTC TCAATCAGGT CGAGATAACC
CAGTCGGTGC AGAATAGCAG CAACACTGTG CCGATGGTTG CGGGTCGTCC AACAGTAGCG
CGCGTGTATG TAACCGTATC CGGCGTTACG GAAGCGTCTA ACGTGATTGT TGAAGCTTCA
GCATCGCGCA ACGGCATTCC CCTGCCCGGC TCGCCGCGCC GCTCGGATCC ACGCACGGTG
ACAACCGGTG TGTCGCGTGG AAACTATGCC AGCAGTTTCA ACCTGGCTTT GCCCGCTGAA
TGGTTGTCGG GCAATGTGCG ACTCAGCATC GTCGTTGATC CCGACAATCG GATCACCGAA
GTGAACGAGA CCAACAATAG TCTGACGCAG ACGCTGGAGT TTCTCGCCGT ACCGCGCCTC
GATCTCACGA TTGTGCCGGT TCAGTACACC CACACCCCCA ACGGGCGCAC CTACCCGGCG
CCGACCCGCG ACACTGTGAG CGATTGGGTG ATGCGCGCCT ATCCCATCCC TGGCATCAAC
GTTCGACTGC GTGCGCCGAT TTCCTTCACC GGTGATTTGC GGAGCGGCAA TGAATGGGAA
CGTCTGCTCG ATCTGATAAC GGATGTCAAA TTGAGCGACG GTGCACCGTC TTCGCGGGTC
TACTACGGCT TGATACCGAT CGCAAATGGG AGTGATCGCT GGTTCAGCAG CGGGATCGCC
GGGATCGGGT GGGTCGGGTT GCGTGCATCG GTGGGGTTGG ATCTGACGGG TTCCACCGAT
GCCGCCGGTC GCCTTGCCGC CCATGAGATC GGGCACAATC TGGGTCGCTT CCATGCGCCG
TGCGGCGTCA GTGGCGATCC ACGTCAACCT TTTCCATACT CGAATGCTTC GATCGGTCCG
GATGTCTATG GTCTCGACAT CAGCCGGGCG CGCGTCTGGA GTCCGGTTGC ACCGGACAAT
ACGAAGGACC TGATGAGTTA TTGTCAACCG CAGTGGGTTT CGGATTTTAC GTATCAGGGA
TTGCTGAATA ATCAGCGCAT CTATGGCGCC AGCGTGATGC AGAGCGGCGC CGGGTATCTG
GTGCGCGCCG TGCTGACGGA CGACGGCACC ACACTGGAAC CGGTGTATGC GCTCGATGGC
GTGACGCCGG ATGCTCCACA GCGCGGCGAA TACACGGTCG AACTGCGGGA CGCTGCCGGA
GCGTTGCTCG CTTCCCATAC GGTCGCTGCT GTCGAAGCGG AAGGACCATA CCGCTATGGC
GAAGAGTCTG TCGCACATGA TCATGATCAT GGGCATATCT ATCGTCGCAT TACCACAGTT
GTGCCGACGC CTGCTGGACC GGTTGCCAGT TTCCGTTTGA TCCGCAATGG GGTGGTCATT
GCGGAACGGG CAACTGACGC TGTGCCGCCA GCAGTCGCAG CCTCCGCAAC CATCGCCCGT
AACAATGCGA CATGGACGCT CTCCTGGTCG AATACATCTG TTCCGGCGCT GGTGCGTTAC
ACCCACGACG GCAGACGCTG GACGACGCTG GGAGTCGATC TGGTCGGCGG ACGTCTGTCG
CTCAATCCGC AGATGCTTCC CGGCGGCGGG CATGGCAGGT TCGAGATCGT TCTGGCTGAC
AGCCGTGGCA TCATCGTTGT TGACGGAACA CCGGCGGCTG CCGATGACGC CCAACCACAG
GCGTGGATCG ATGGTCCTGC GACGCTGCCG GTTGGTGCGC CGCTGCTGCT CTATGGAAGG
GCGTCGGATC GCGATGATGG CGCGCTCGAC GATCCTGCCT GGCAGGTCAA TGGCGTATCG
GTAGGAACGG GACAGACAGT ATTTCTCGAC AATCTCGCGC CGGGCGAGTA CCATGTTCGT
CTGACGGCGC GCGATAGCGC AGGGAACGTG GGGTACGCCG ATCATCTGGT TCGAGTCGAA
CAGCGTTGA
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| Protein sequence | MHHHTMLALI LVLLPVFLAT HDYPAARADL SSPSSDRRVY LPLITRPATI DLVLNQVEIT
QSVQNSSNTV PMVAGRPTVA RVYVTVSGVT EASNVIVEAS ASRNGIPLPG SPRRSDPRTV
TTGVSRGNYA SSFNLALPAE WLSGNVRLSI VVDPDNRITE VNETNNSLTQ TLEFLAVPRL
DLTIVPVQYT HTPNGRTYPA PTRDTVSDWV MRAYPIPGIN VRLRAPISFT GDLRSGNEWE
RLLDLITDVK LSDGAPSSRV YYGLIPIANG SDRWFSSGIA GIGWVGLRAS VGLDLTGSTD
AAGRLAAHEI GHNLGRFHAP CGVSGDPRQP FPYSNASIGP DVYGLDISRA RVWSPVAPDN
TKDLMSYCQP QWVSDFTYQG LLNNQRIYGA SVMQSGAGYL VRAVLTDDGT TLEPVYALDG
VTPDAPQRGE YTVELRDAAG ALLASHTVAA VEAEGPYRYG EESVAHDHDH GHIYRRITTV
VPTPAGPVAS FRLIRNGVVI AERATDAVPP AVAASATIAR NNATWTLSWS NTSVPALVRY
THDGRRWTTL GVDLVGGRLS LNPQMLPGGG HGRFEIVLAD SRGIIVVDGT PAAADDAQPQ
AWIDGPATLP VGAPLLLYGR ASDRDDGALD DPAWQVNGVS VGTGQTVFLD NLAPGEYHVR
LTARDSAGNV GYADHLVRVE QR
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