8 homologs were found in PanDaTox collection
for query gene RoseRS_3028 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_3028  hypothetical protein  100 
 
 
175 aa  353  8.999999999999999e-97  Roseiflexus sp. RS-1  Bacteria  normal  0.787294  normal 
 
 
-
 
NC_009767  Rcas_2146  hypothetical protein  77.14 
 
 
175 aa  284  4e-76  Roseiflexus castenholzii DSM 13941  Bacteria  decreased coverage  0.000101622  hitchhiker  0.0020762 
 
 
-
 
NC_011831  Cagg_3398  hypothetical protein  49.71 
 
 
175 aa  155  2e-37  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000114193  normal 
 
 
-
 
NC_009767  Rcas_0529  hypothetical protein  42.37 
 
 
177 aa  140  9.999999999999999e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.114246  normal 
 
 
-
 
NC_011831  Cagg_1574  hypothetical protein  54.03 
 
 
168 aa  138  4.999999999999999e-32  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_4426  hypothetical protein  42.36 
 
 
190 aa  137  6e-32  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000335847  n/a   
 
 
-
 
NC_009972  Haur_3685  hypothetical protein  50.82 
 
 
193 aa  134  5e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000267077  n/a   
 
 
-
 
NC_009523  RoseRS_0662  hypothetical protein  44.96 
 
 
176 aa  116  9.999999999999999e-26  Roseiflexus sp. RS-1  Bacteria  decreased coverage  0.00000768086  normal 
 
 
-
 
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