Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0529 |
Symbol | |
ID | 5537992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 692995 |
End bp | 693528 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640892691 |
Product | hypothetical protein |
Protein accession | YP_001430677 |
Protein GI | 156740548 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.114246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGTGA CCAGCAAGGA TCTGCGCAAT AATGCGCGTC TCTCGGCGAG TCGCCCACTG ACGATTGTTC CGCGTGTGGG CGTCAACAGC GTCATGTATC TGATCACCGG GTTGCTGGCG CTTCTGGCGA TCTATGCTGT AATGGGCAAT GTTGTCGGAT GGGGGCGCGA ACGGCTTGAT GATCTGCGCT ACGGAGCAAC GCGCACCTTC CATGCGCAGG CAGTTGTCGG GCACGATGAT AATCCGGCCA CGCCAAGCCA CTTTGTTGCG ATGAACCTCA ACCGGCAAGT CGTGGTGATC TACATGCCGG GCGGCGACAG CACGAAAACC AGAGTGATCA CCGGTCCATA TTTGTTCGGC GCCGGGGAGG ACAAAACGCC TGTGCTGCTC GATTTTGCCG ATCTCAACAA CGACGGCGCG CTCGACATGC TGGTAAAGGT CAAGAACGAG GCGATTGTCT ATCTGAATCG CAACGGTCAG TTCGAGCCAA TTTCGGCTGA GGATCGCGCG CTGCTGATGG AGATGAGGCG GTGA
|
Protein sequence | MAVTSKDLRN NARLSASRPL TIVPRVGVNS VMYLITGLLA LLAIYAVMGN VVGWGRERLD DLRYGATRTF HAQAVVGHDD NPATPSHFVA MNLNRQVVVI YMPGGDSTKT RVITGPYLFG AGEDKTPVLL DFADLNNDGA LDMLVKVKNE AIVYLNRNGQ FEPISAEDRA LLMEMRR
|
| |