10 homologs were found in PanDaTox collection
for query gene Rmet_4489 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007974  Rmet_4489  phage head/capsid assembly protein  100 
 
 		 358 aa  746    Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.157789 
 
 
-
 
NC_008752  Aave_3596  zonular occludens toxin  45.79 
 
 		 336 aa  225  8e-58  Acidovorax citrulli AAC00-1  Bacteria  normal  1  decreased coverage  0.000950615 
 
 
-
 
NC_012856  Rpic12D_2140  Zonular occludens toxin  37.97 
 
 		 276 aa  192  5e-48  Ralstonia pickettii 12D  Bacteria  normal  0.0914527  normal  1 
 
 
-
 
NC_013456  VEA_003454  hypothetical protein  32.64 
 
 		 357 aa  174  2.9999999999999996e-42  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_1458  hypothetical protein  31.8 
 
 		 349 aa  134  1.9999999999999998e-30  Methylobacillus flagellatus KT  Bacteria  normal  0.212155  normal  0.0578189 
 
 
-
 
NC_009801  EcE24377A_1699  hypothetical protein  28.24 
 
 		 418 aa  80.1  0.00000000000005  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1572  hypothetical protein  25.51 
 
 		 224 aa  61.6  0.00000002  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1583  hypothetical protein  25.51 
 
 		 224 aa  61.6  0.00000002  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1594  hypothetical protein  25.51 
 
 		 224 aa  61.6  0.00000002  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_1760  hypothetical protein  30.41 
 
 		 372 aa  50.4  0.00005  Pelobacter propionicus DSM 2379  Bacteria  normal  0.595315  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>