Gene VEA_003454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003454 
Symbol 
ID8557187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2038768 
End bp2039841 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content48% 
IMG OID646406549 
Producthypothetical protein 
Protein accessionYP_003286079 
Protein GI262394225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCGG TCTACTTTGT CACGGGTAAG CTCGGCTCAG GCAAAACGCT AACAGCAGTC 
GGTAAGATTC GCGAGGCGTT TATGCGCGGT GTGCCTGTAG CGACAAACCT CGATATCAAC
TTGAAAGAAA TGCTTGGACG CGATAAGCGC AACACTCGCC TTTACCGTCT GCCGGACAAG
CCTCAAGTGG AAGATTTGAT GGTGATTGGT TCGGCAAACA AGAGCTATGA CACCAAAAAA
GACGGCTTGA TTGTGCTCGA TGAGTGCGGA ACGTGGTTTA ACTCGCGCAC ATGGAACGAT
AAGAATCGAC AAAAGTTAAT TGATCACCTT TTGCATATTC GAAAGCTTGG ATGGGATGTG
ATTTTCATCG TTCAAGACAT TTCGATTGTT GATAAGCAAG CGCGTCTCGC TCTGGCTGAA
CACACCGTTT TTTGTCGTCG TTTAGACCGT CTTCAAGTCC CTATCATCTC GACTGCGGTA
TCCGTTCTGA CGCTCGGTCA ACTCAAGTTG AAAATGCCTA AGCTGCACGT TGGCATTGTG
AAGTATGGTG ACAACGCTAA CTCGCTCACC GTCGATAAAT GGATGCTCTG GGGTACGGAC
TTATACAGCT CTTATGACAC TAAGCAGATG TTTAGAAACA ACTATGAGGA CGGCGTTTTT
TCAGTATTGC CGCCCTATTA TACCCATGGA CGTTACACTG TCCCGTATAC GTTGAGAAAT
ATCATGCGCA TTACGAAAAT CTATCTCCGT AAATACTCTC GATTCAGTGT ATTTGCGGCA
GGTGTCGCCG TCTCGTTTGC GGTGTTCACC TTAGTTGGCA CACCGAACAT ATCGACGGAA
CCCGAAACGG CTCAAGCCTC GGAGCCTCGC GAGTCATTGA GTGACTTGCT CGACGGCTAT
CGAATCGAAT CGTCAATGAA TCCCCCAAAT GTAGCCCCGT CTTTTGTGCT CGTTAAGGAC
GATGTGCGTC TGTCGTCGTC GCAACTATAC GCAAAGGGCT TTACGGCTCA ATCTAACGGC
TCTTGCTCCA TTACGGTTAG CGGCAACGGT CAATCATTCA AAGTCATGTG CTAG
 
Protein sequence
MASVYFVTGK LGSGKTLTAV GKIREAFMRG VPVATNLDIN LKEMLGRDKR NTRLYRLPDK 
PQVEDLMVIG SANKSYDTKK DGLIVLDECG TWFNSRTWND KNRQKLIDHL LHIRKLGWDV
IFIVQDISIV DKQARLALAE HTVFCRRLDR LQVPIISTAV SVLTLGQLKL KMPKLHVGIV
KYGDNANSLT VDKWMLWGTD LYSSYDTKQM FRNNYEDGVF SVLPPYYTHG RYTVPYTLRN
IMRITKIYLR KYSRFSVFAA GVAVSFAVFT LVGTPNISTE PETAQASEPR ESLSDLLDGY
RIESSMNPPN VAPSFVLVKD DVRLSSSQLY AKGFTAQSNG SCSITVSGNG QSFKVMC