8 homologs were found in PanDaTox collection
for query gene Rmet_4485 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007974  Rmet_4485  hypothetical protein  100 
 
 
287 aa  567  1e-161  Cupriavidus metallidurans CH34  Bacteria  normal  0.0543435  normal  0.0229003 
 
 
-
 
NC_011992  Dtpsy_1843  hypothetical protein  49.13 
 
 
290 aa  271  7e-72  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2034  hypothetical protein  48.78 
 
 
290 aa  270  2e-71  Acidovorax sp. JS42  Bacteria  hitchhiker  0.00517956  normal 
 
 
-
 
NC_010002  Daci_5722  hypothetical protein  47.89 
 
 
291 aa  257  1e-67  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.0073489  normal  0.542005 
 
 
-
 
NC_011662  Tmz1t_3580  hypothetical protein  46.69 
 
 
290 aa  251  7e-66  Thauera sp. MZ1T  Bacteria  normal  0.0595372  n/a   
 
 
-
 
NC_010424  Daud_0570  hypothetical protein  34.74 
 
 
295 aa  122  5e-27  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.306427  n/a   
 
 
-
 
NC_013517  Sterm_4028  adhesin HecA family  22.38 
 
 
2964 aa  52.8  0.000007  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3410  hypothetical protein  32.81 
 
 
316 aa  43.5  0.004  Delftia acidovorans SPH-1  Bacteria  hitchhiker  0.00000374357  hitchhiker  0.0017723 
 
 
-
 
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