| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4485 |
|---|
| Symbol | |
|---|
| ID | 4041344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 1084523 |
|---|
| End bp | 1085386 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637979907 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_586619 |
|---|
| Protein GI | 94313410 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0543435 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0229003 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTCT CTCAAAACCT TATCAAGGCC AAACGCCCCT GCGCGGATGG ATACAAATGG
TTTCTGCGCA ATCGCGACGG TGGTAGCGAC TATCAACGCC TGCTCGATGC GCTGGTTCGC
GCGGATCGCG TTGCCGATGC CTGCTGGCTG CTCCAGCAGT TTGGCCCGAC CGATGCGGTG
CTCATGCTGA ATGCGCTTGA CGCAAAGGCG TTGGTCTTCG CCGGCACAGT GATTGTGAAG
GGAAGCGTCG ACATCGAATC TGTGATCCGG GTCGGACACA GCATCCGTGT CGGCGCGGGC
ATCCGGGCGG GTACTGCGAT AGTGGCCGGT ACGGATATCG ACTGCGGGGG GAATGTCTAC
AGCGGTGGCT CCATCGAAGC TGGCGACGAT ATCAAGGCCA GTTGGGGAGT CGAGGCCGAA
ACAAGGATCG ATTGTGGCGG CAATCTCCGC GCCGGTTGGT ATGTCACTGC CGGCGAGCGC
ATATCGACGC ATGGCAACCT GTTCGCTGGA GACGGCATTA CCGCGCAAGG CGCTATCCAT
TGTGGCCGTG GCATCAGGGC TGGCGAAAGC ATTGATGGAC AGCACGACAT CATTGCCGGC
TGTGGCATCG AGGCTGGCGG TGCCATTCAC GCCGGTCAGC ACCTGGAAGC TGGATGGGGT
ATCAAAGCCA AAGGCTCCAT CGTTGCCGAA GGGGCCATCA AGGCGGGCGA GGGAATCCAA
ACCGAGGAAG ATATCCTGAC CGGCGCAGGC TATGGCATTT ACGCGGGCCT GAATGTGCGC
GTCGACGCCT GGGAGGATTG CGCCCGTATC ATTGCGCGGC AAAAACCGAC CGAGTTGATT
AGCGGAAGCT GGGGCCCCCG CTGA
|
|---|
| Protein sequence | MELSQNLIKA KRPCADGYKW FLRNRDGGSD YQRLLDALVR ADRVADACWL LQQFGPTDAV
LMLNALDAKA LVFAGTVIVK GSVDIESVIR VGHSIRVGAG IRAGTAIVAG TDIDCGGNVY
SGGSIEAGDD IKASWGVEAE TRIDCGGNLR AGWYVTAGER ISTHGNLFAG DGITAQGAIH
CGRGIRAGES IDGQHDIIAG CGIEAGGAIH AGQHLEAGWG IKAKGSIVAE GAIKAGEGIQ
TEEDILTGAG YGIYAGLNVR VDAWEDCARI IARQKPTELI SGSWGPR
|
|---|
| |