8 homologs were found in PanDaTox collection
for query gene Rmet_2592 on replicon NC_007973
Organism: Cupriavidus metallidurans CH34



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007973  Rmet_2592  hypothetical protein  100 
 
 
265 aa  540  1e-153  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.757678 
 
 
-
 
NC_008009  Acid345_2287  hypothetical protein  28.5 
 
 
248 aa  86.3  5e-16  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_3304  hypothetical protein  50 
 
 
117 aa  66.6  0.0000000004  Dechloromonas aromatica RCB  Bacteria  normal  0.143996  normal  0.165423 
 
 
-
 
NC_007908  Rfer_1815  hypothetical protein  40.3 
 
 
199 aa  50.8  0.00002  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A3768  hypothetical protein  43.33 
 
 
111 aa  50.4  0.00003  Methylibium petroleiphilum PM1  Bacteria  normal  0.128649  normal  0.0419519 
 
 
-
 
NC_008554  Sfum_2033  hypothetical protein  31.53 
 
 
110 aa  48.9  0.00008  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.62301 
 
 
-
 
NC_007498  Pcar_1543  hypothetical protein  30.91 
 
 
155 aa  48.5  0.0001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3378  hypothetical protein  27.05 
 
 
207 aa  46.6  0.0004  Polaromonas sp. JS666  Bacteria  normal  0.213597  normal  0.0976482 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>