5 homologs were found in PanDaTox collection
for query gene Rmet_2499 on replicon NC_007973
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007973  Rmet_2499  hypothetical protein  100 
 
 
160 aa  300  6.000000000000001e-81  Cupriavidus metallidurans CH34  Bacteria  normal  0.0165964  normal 
 
 
-
 
NC_009512  Pput_1974  hypothetical protein  44.05 
 
 
148 aa  57.4  0.00000009  Pseudomonas putida F1  Bacteria  normal  normal  0.0227032 
 
 
-
 
NC_010322  PputGB1_2121  hypothetical protein  43.48 
 
 
148 aa  56.6  0.0000002  Pseudomonas putida GB-1  Bacteria  normal  0.460411  hitchhiker  0.00638074 
 
 
-
 
NC_002947  PP_3795  hypothetical protein  41.67 
 
 
148 aa  54.7  0.0000005  Pseudomonas putida KT2440  Bacteria  normal  normal  0.100571 
 
 
-
 
NC_010501  PputW619_2096  hypothetical protein  34.83 
 
 
143 aa  46.6  0.0002  Pseudomonas putida W619  Bacteria  normal  0.413593  normal 
 
 
-
 
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