11 homologs were found in PanDaTox collection
for query gene Rmet_1509 on replicon NC_007973
Organism: Cupriavidus metallidurans CH34



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007973  Rmet_1509  hypothetical protein  100 
 
 		 54 aa  111  3e-24  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.000000102349  hitchhiker  0.000245358 
 
 
-
 
NC_007614  Nmul_A0685  ribulose-bisphosphate carboxylase  58.97 
 
 		 144 aa  53.5  0.0000008  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.290426  n/a   
 
 
-
 
NC_009485  BBta_0452  ribulose 1,5-bisphosphate carboxylase small subunit  56.41 
 
 		 139 aa  48.5  0.00003  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.101113 
 
 
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NC_007484  Noc_0332  ribulose-bisphosphate carboxylase  53.85 
 
 		 145 aa  47  0.0001  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.000025723  n/a   
 
 
-
 
NC_007925  RPC_1328  ribulose-bisphosphate carboxylase  51.28 
 
 		 141 aa  43.9  0.0007  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.292967  normal  0.768597 
 
 
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NC_007778  RPB_3963  ribulose-bisphosphate carboxylase form I small subunit CbbS  51.28 
 
 		 140 aa  43.5  0.001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.946832  normal  0.145811 
 
 
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NC_011004  Rpal_1748  Ribulose-bisphosphate carboxylase  46.15 
 
 		 140 aa  42.4  0.002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_6396  ribulose 1,5-bisphosphate carboxylase small subunit  39.29 
 
 		 139 aa  42  0.003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0957132  normal  1 
 
 
-
 
NC_007958  RPD_3721  ribulose-bisphosphate carboxylase  48.72 
 
 		 141 aa  41.6  0.004  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.174277  hitchhiker  0.00159436 
 
 
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NC_007959  Nham_4050  ribulose bisphosphate carboxylase, small chain  45.61 
 
 		 141 aa  40.8  0.006  Nitrobacter hamburgensis X14  Bacteria  normal  0.184894  n/a   
 
 
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NC_007964  Nham_3750  ribulose-bisphosphate carboxylase  45.61 
 
 		 141 aa  40.8  0.006  Nitrobacter hamburgensis X14  Bacteria  normal  0.516421  n/a   
 
 
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