Gene RPD_3721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_3721 
Symbol 
ID4024237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp4155865 
End bp4156290 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content62% 
IMG OID637963925 
Productribulose-bisphosphate carboxylase 
Protein accessionYP_570843 
Protein GI91978184 
COG category[C] Energy production and conversion 
COG ID[COG4451] Ribulose bisphosphate carboxylase small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.174277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00159436 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGAATGA CTCAAGGCTG TTTCTCATAC CTGCCCGACC TCACCGACGA GCAAATCTCC 
GCGCAGGTGC AATACGCGCT CGGTAAGGGC TGGGCGGTGA ACCTCGAATT CACCGACGAC
CCGCATCCCC GCAACACTTA TTGGGAGATG TGGGCCTTGC CGATGTTCGA CCTTCAGGAT
GCCGCCGGCG TGCTGATGGA ACTCACCGAA TGCCGCAAGG TCTATGGCGA TCGCTACATC
CGGCTGTCGG CTTTCGACTC CAGCCACGGC TGGGAATCGG TACGGCTGTC CTTCATCGTC
CACCGTCCGA AGGACGAGCC CGGCTTCCGG CTCGACCGCC AGGAAGTCGA CGGACGCAAC
ATCCGCTACA CCACCAAGGC CTATGCGGCT GACAAGCCCG AGGGCCGGCG TTACGGAGGG
GAGTGA
 
Protein sequence
MRMTQGCFSY LPDLTDEQIS AQVQYALGKG WAVNLEFTDD PHPRNTYWEM WALPMFDLQD 
AAGVLMELTE CRKVYGDRYI RLSAFDSSHG WESVRLSFIV HRPKDEPGFR LDRQEVDGRN
IRYTTKAYAA DKPEGRRYGG E