Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_3721 |
Symbol | |
ID | 4024237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 4155865 |
End bp | 4156290 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637963925 |
Product | ribulose-bisphosphate carboxylase |
Protein accession | YP_570843 |
Protein GI | 91978184 |
COG category | [C] Energy production and conversion |
COG ID | [COG4451] Ribulose bisphosphate carboxylase small subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.174277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00159436 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGAATGA CTCAAGGCTG TTTCTCATAC CTGCCCGACC TCACCGACGA GCAAATCTCC GCGCAGGTGC AATACGCGCT CGGTAAGGGC TGGGCGGTGA ACCTCGAATT CACCGACGAC CCGCATCCCC GCAACACTTA TTGGGAGATG TGGGCCTTGC CGATGTTCGA CCTTCAGGAT GCCGCCGGCG TGCTGATGGA ACTCACCGAA TGCCGCAAGG TCTATGGCGA TCGCTACATC CGGCTGTCGG CTTTCGACTC CAGCCACGGC TGGGAATCGG TACGGCTGTC CTTCATCGTC CACCGTCCGA AGGACGAGCC CGGCTTCCGG CTCGACCGCC AGGAAGTCGA CGGACGCAAC ATCCGCTACA CCACCAAGGC CTATGCGGCT GACAAGCCCG AGGGCCGGCG TTACGGAGGG GAGTGA
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Protein sequence | MRMTQGCFSY LPDLTDEQIS AQVQYALGKG WAVNLEFTDD PHPRNTYWEM WALPMFDLQD AAGVLMELTE CRKVYGDRYI RLSAFDSSHG WESVRLSFIV HRPKDEPGFR LDRQEVDGRN IRYTTKAYAA DKPEGRRYGG E
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