8 homologs were found in PanDaTox collection
for query gene Rcas_4400 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_4400  hypothetical protein  100 
 
 
89 aa  171  1.9999999999999998e-42  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0384767 
 
 
-
 
NC_013530  Xcel_1758  hypothetical protein  43.84 
 
 
98 aa  50.8  0.000007  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.380189  n/a   
 
 
-
 
NC_009972  Haur_0302  hypothetical protein  63.16 
 
 
152 aa  48.9  0.00003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.548464  n/a   
 
 
-
 
NC_011884  Cyan7425_0301  hypothetical protein  45 
 
 
84 aa  44.3  0.0005  Cyanothece sp. PCC 7425  Bacteria  normal  0.179146  normal  0.50723 
 
 
-
 
NC_013172  Bfae_31740  hypothetical protein  51.16 
 
 
93 aa  44.3  0.0006  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_0786  ribosomal protein L12  51.28 
 
 
95 aa  41.6  0.004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009777  VIBHAR_p08190  hypothetical protein  38.89 
 
 
94 aa  41.6  0.004  Vibrio harveyi ATCC BAA-1116  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2564  hypothetical protein  36.51 
 
 
95 aa  41.2  0.005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0537869  normal  0.0608845 
 
 
-
 
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