Gene Rcas_4400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4400 
Symbol 
ID5541913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5653360 
End bp5653629 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content46% 
IMG OID640896500 
Producthypothetical protein 
Protein accessionYP_001434436 
Protein GI156744307 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0384767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCTC TTGAAAGGGA ACGTCTGTCG ACATTGATGA AGCAAGTCCA TCTCCTTGAA 
CGGAAAGTAG ATTTCCTGCT TCAGCATCTC CATTTGGAGT ATCAGGAAGA GGAACCGGGT
TTAATGGTTC GGCCGCAAAT CGAAGCGTTG TTGAAACAAG GTAAGCAAAT TGAGGCCATC
AAGCTTTATC GTCTGGAAAC GGGGCTAGGA CTTAAGGAGG CAAAGGACGC TATCGAGAAG
ATTGATAAAG AGTTGAAAGG CAAGCGGTAA
 
Protein sequence
MDSLERERLS TLMKQVHLLE RKVDFLLQHL HLEYQEEEPG LMVRPQIEAL LKQGKQIEAI 
KLYRLETGLG LKEAKDAIEK IDKELKGKR