9 homologs were found in PanDaTox collection
for query gene Rcas_3965 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_3965  hypothetical protein  100 
 
 
107 aa  217  5e-56  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.854117  normal  0.151261 
 
 
-
 
NC_009523  RoseRS_1125  hypothetical protein  78.5 
 
 
107 aa  166  1e-40  Roseiflexus sp. RS-1  Bacteria  normal  0.771447  normal 
 
 
-
 
NC_011831  Cagg_0811  hypothetical protein  49.51 
 
 
107 aa  97.8  5e-20  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.56091  normal 
 
 
-
 
NC_008228  Patl_4045  hypothetical protein  46.15 
 
 
97 aa  58.5  0.00000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1424  hypothetical protein  46.15 
 
 
97 aa  54.7  0.0000004  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.543815  n/a   
 
 
-
 
NC_007494  RSP_3061  hypothetical protein  42.03 
 
 
103 aa  52.4  0.000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.991333  n/a   
 
 
-
 
NC_009050  Rsph17029_3789  hypothetical protein  42.03 
 
 
103 aa  52.4  0.000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.958116  normal  0.234939 
 
 
-
 
NC_009429  Rsph17025_3893  hypothetical protein  44.07 
 
 
103 aa  50.4  0.000007  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.918858  normal  0.512249 
 
 
-
 
NC_010505  Mrad2831_1199  hypothetical protein  29.9 
 
 
105 aa  40.8  0.006  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.709062  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>