Gene Rcas_3965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3965 
Symbol 
ID5541471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5171089 
End bp5171412 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content56% 
IMG OID640896073 
Producthypothetical protein 
Protein accessionYP_001434016 
Protein GI156743887 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.854117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.151261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCC TCTCGACGGT TGACCGCAAT ACAGTTCTTG CGCTGGTCAT CGCCAGTCTG 
TGCGATCTCT ACGAGCAGAA CGGCATCACT GCCGGTGACG AGCCTGGCGA AGACACGTAC
CTGATCGGCA GGCGCGCATT ACTGGACTCG CTCGGTCTGG TGACGTTGAT CGTCGATCTG
GAACAGAAGA TCGAAGAGAT TTTTGATGTC GCTCTTACAC TGGCGAATGA ACGCGCCATG
TCGCAGAAGC ACAGCCCATT TTTGACAGTT GGTTCGCTGG CGGATTACAT TTGCGCGCTG
CTCAACGAGC AGCGCCATGC CTGA
 
Protein sequence
MTTLSTVDRN TVLALVIASL CDLYEQNGIT AGDEPGEDTY LIGRRALLDS LGLVTLIVDL 
EQKIEEIFDV ALTLANERAM SQKHSPFLTV GSLADYICAL LNEQRHA