3 homologs were found in PanDaTox collection
for query gene RSp1000 on replicon NC_003296
Organism: Ralstonia solanacearum GMI1000



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003296  RSp1000  TEK-like protein  100 
 
 
517 aa  981    Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.0278094 
 
 
-
 
NC_003296  RSp1002  TEK signal peptide protein  56.92 
 
 
569 aa  538  9.999999999999999e-153  Ralstonia solanacearum GMI1000  Bacteria  normal  decreased coverage  0.00217229 
 
 
-
 
NC_007575  Suden_1952  hypothetical protein  32.18 
 
 
1538 aa  55.8  0.000002  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.0131034  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>