| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSp1002 |
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| Symbol | tek |
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| ID | 1223314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1262422 |
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| End bp | 1264131 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637240867 |
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| Product | TEK signal peptide protein |
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| Protein accession | NP_522563 |
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| Protein GI | 17549223 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00217229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCAAGCAC AGTTCAAGAA GCGAGCATTG GTTTTAGGGG TAAGCGCATC CGCCATCGCG
GCGCTGGTCG CATGCGGCGG CGGTGGCTCG GAATCGGGGG CCTCGCTGTC CCCGAGCCAA
GTCCAGGGCA AGGCTGTCGA CTTCTATCTA TCGCAGGCGA ACGTCGTCTT CACGGACTGC
AACAACCAGA CGACGACCAC GGACAACGAG GGCAACTTCA CCATCCCGAG CAATTGCGCC
AAGAGCGCGA TCACGGTGTC GGGCGGTACC GATATCGGCA CTGGGCTGCC GTTCACCGGC
GTGCTGCAGG CGCCCGCCGC CGATCTGACA CAGGGCGGCA CGGCGCTGGT GTCGCCGATG
ACCACCCTGC TGGCGCAGGT CGGTACGGGC CAGAGTTCGG TCCTGGCGAG CAAGCTGGGC
CTGCAGGCCA GCGACCTGCT GAACAAAGAC CCGATGAACG ATTCGGGGCT GCTCCAGAAC
GCCGTGGTCA TGCAGCAGCT GATCGATCAG ATCGCCAAGG CGCTGACCGG GCTGTCCCAG
AGCACGGGCG GCACGTTGAC CCCGACTGCT GCAGCCGCAG CGGCCGCAGC GGCAGTCGCC
AGCGTGCTGG TCGGCTCGAC CGGCTCCGCT GATCTGAGCG ATCCGACCCT GATTGCGAAC
GCTATTGTGA CGGCGGTGAA GAACAGCGCC GCCTCGTTGC CCGCCAGTGT GGTGGCCAAC
GTCGACGCGA TCGCCGCCAA CCTGGCCGCG CTGATTGCGC CGGTGATTGC CGGCAATGTG
GCCAACGTCA ATGACAGCCT CGACAGCGTG GAACTGAGCG CCACGCCGTC CGAGACGCTG
GCATCGCTGC AGAAGGCCGG CTCGATGCAC GCCGTGGTCG ATAGCGTGCA GTCGAGCGCG
TCCAACCTGC TGGCGGCGGC GATCTCGCCG GCAGCGCTGC GCGATACCTT GCTGTCGGAC
AGCCTTTCCG GGCTGGGTAC CGCAGTCGCG GAGGGTGACG AAGACACCAT CACCGAGGCC
GCGGCCACGC TGGGCAGCAA TGTCGACAGC AACAACCTGG GCAACATCAT CAGCCGCGTC
AAGTACAAGA ACTTCCTGCG TGTCGACAGC ATCAGCGTCA ATGACACGGT GGTTCCGGTT
GCCAGCGCGA TCACGCTGCG GGGCGGCACG ATTTCGAGCC TGAAGACCAG CGTGACGCAG
GTGGGCAGCC CGTTCGGCTA CAACAATTCG GAAATCCGGG CCGGCGTGCG GTATCGCTAT
AACGGCAACG AACTGAATGC CGTGATCCAG CGGATCGTGC TGACCTTCAA CAGCAGCAAC
AAGCTGGTGG CCGCGCAGGT GCCCGCCGGT ACCAACTTCG AGTTCGTCCT GAAGGGCGAT
ACCAACACCC GCCTTTCGGT CACGAGCACG GGCGACAACC TGCTCGACGG CAGCACCGGG
CAACTCGTTC TGCCGATCGA CAAGCTCCAG GCCAAGCTCA AGAATTCGGG CATCCTGACC
GCAGCGCAGG TCGACGCGCT GACGCCGAAG GCACCCGCCC GGGTCGACAT GGCGCTTGCG
ATTGCAGGCA CGTCTGGCCA GATGGTTCGG GTGAGGGCGG CGACCGGCCA CGGCAATCGC
ACGAAGTCGC TGCCGGTGAT TCGCATCAAC GCCGGAGATA GCTCGGTGGT CGGCTACGGG
AAGCGGAGCG TCGTCACGCT GCTGCCCTGA
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| Protein sequence | MQAQFKKRAL VLGVSASAIA ALVACGGGGS ESGASLSPSQ VQGKAVDFYL SQANVVFTDC
NNQTTTTDNE GNFTIPSNCA KSAITVSGGT DIGTGLPFTG VLQAPAADLT QGGTALVSPM
TTLLAQVGTG QSSVLASKLG LQASDLLNKD PMNDSGLLQN AVVMQQLIDQ IAKALTGLSQ
STGGTLTPTA AAAAAAAAVA SVLVGSTGSA DLSDPTLIAN AIVTAVKNSA ASLPASVVAN
VDAIAANLAA LIAPVIAGNV ANVNDSLDSV ELSATPSETL ASLQKAGSMH AVVDSVQSSA
SNLLAAAISP AALRDTLLSD SLSGLGTAVA EGDEDTITEA AATLGSNVDS NNLGNIISRV
KYKNFLRVDS ISVNDTVVPV ASAITLRGGT ISSLKTSVTQ VGSPFGYNNS EIRAGVRYRY
NGNELNAVIQ RIVLTFNSSN KLVAAQVPAG TNFEFVLKGD TNTRLSVTST GDNLLDGSTG
QLVLPIDKLQ AKLKNSGILT AAQVDALTPK APARVDMALA IAGTSGQMVR VRAATGHGNR
TKSLPVIRIN AGDSSVVGYG KRSVVTLLP
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