9 homologs were found in PanDaTox collection
for query gene RSc2264 on replicon NC_003295
Organism: Ralstonia solanacearum GMI1000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_003295  RSc2264  lipoprotein  100 
 
 
50 aa  98.6  3e-20  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.268722 
 
 
-
 
NC_007651  BTH_I0079  putative lipoprotein  74.51 
 
 
51 aa  77  0.00000000000008  Burkholderia thailandensis E264  Bacteria  hitchhiker  0.00118423  n/a   
 
 
-
 
NC_009074  BURPS668_0109  hypothetical protein  74.51 
 
 
51 aa  77  0.00000000000008  Burkholderia pseudomallei 668  Bacteria  hitchhiker  0.00129523  n/a   
 
 
-
 
NC_010623  Bphy_4583  putative lipoprotein  65.45 
 
 
63 aa  66.6  0.0000000001  Burkholderia phymatum STM815  Bacteria  normal  normal  0.380971 
 
 
-
 
NC_008062  Bcen_5588  putative lipoprotein  66.04 
 
 
53 aa  48.9  0.00002  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_5952  putative lipoprotein  66.04 
 
 
53 aa  48.9  0.00002  Burkholderia cenocepacia HI2424  Bacteria  normal  0.983609  normal  0.233405 
 
 
-
 
NC_010512  Bcenmc03_6453  putative lipoprotein  66.04 
 
 
53 aa  48.9  0.00002  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_3910  putative lipoprotein  66.04 
 
 
53 aa  48.9  0.00002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.229727  normal  0.231012 
 
 
-
 
NC_008391  Bamb_3403  putative lipoprotein  66.04 
 
 
53 aa  48.1  0.00004  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.179806 
 
 
-
 
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