10 homologs were found in PanDaTox collection
for query gene RSc1933 on replicon NC_003295
Organism: Ralstonia solanacearum GMI1000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_003295  RSc1933  phage-like transmembrane protein  100 
 
 		 134 aa  248  2e-65  Ralstonia solanacearum GMI1000  Bacteria  normal  0.450392  normal  0.83944 
 
 
-
 
NC_010086  Bmul_4842  putative phage-related transmembrane protein  46.34 
 
 		 124 aa  99.8  1e-20  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.222645  normal  1 
 
 
-
 
NC_010508  Bcenmc03_0201  putative phage-related transmembrane protein  45.53 
 
 		 124 aa  99.8  1e-20  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.112385 
 
 
-
 
NC_009997  Sbal195_2910  putative phage-related transmembrane protein  32.52 
 
 		 125 aa  71.6  0.000000000004  Shewanella baltica OS195  Bacteria  normal  0.0962523  normal  0.454239 
 
 
-
 
NC_009829  Spro_4930  putative phage-related transmembrane protein  33.86 
 
 		 127 aa  68.2  0.00000000004  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007650  BTH_II1345  hypothetical protein  37.6 
 
 		 114 aa  55.5  0.0000003  Burkholderia thailandensis E264  Bacteria  normal  0.886915  n/a   
 
 
-
 
NC_010717  PXO_01357  hypothetical protein  31.45 
 
 		 118 aa  45.8  0.0002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  decreased coverage  0.00864531  n/a   
 
 
-
 
NC_011094  SeSA_A4455  putative prophage membrane protein  30.48 
 
 		 114 aa  45.1  0.0004  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.057965  unclonable  0.000000000855278 
 
 
-
 
NC_009801  EcE24377A_1276  hypothetical protein  37.18 
 
 		 130 aa  42  0.003  Escherichia coli E24377A  Bacteria  normal  0.184156  n/a   
 
 
-
 
NC_008463  PA14_52510  hypothetical protein  32.11 
 
 		 124 aa  40.8  0.007  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0000219879  normal  1 
 
 
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